Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1225 ATGATAGGGCAGGAGGACACTGGACAGAAAGAGAGGTCCCAGTGGATACTGAATTCCCCCAACCCACCTGCTCTGTGGAATAAGCTGTTCAGAACAGTCAAGGAGACTATCTCGCCTCATGGGAGCAAGTTGCTTTCATCATCCAAGAAGCAGACTGGCCATAGACATGTTGTTTCGTTCTTGCAGAGTTTATTCCCAATCCTTGTTTGGTTCAGAAATTACAAAGCCTCCAAGTTTAAAGATGATTTGTTAGCTGGTTTAACTCTTGCCAGCCTGAGCATACCTCAGAGCATAGGATATGCTAATTTAGCAAAACTTGACCCTCAATATGGCCTGTATACAAGTGTTATTCCTCCTCTTATTTATGCTGTAATGGGGAGCTCAAGGGAAATTGCAATTGGACCTGTTGCTGTTGTGTCGTTGCTGTTATCCTCCACAATCCAGAAAGTGATAGACCCTATCGCTAACCCAGATGCCTACAGAAGGCTTGTCTTCACGGTCACCTTCTTTGCTGGAATCTTCCAAGCTGCATTTGGCATTTTTAGGTTAGGTTTTCTTGTGGATTTTCTTTCACATTCTGCCCTCGTTGGATTCATGGCAGGTGCAGCCATCGTTATTGGTCTTCAGCAACTGAAGGGGCTTCTTGGGATTATTCACTTCACTAACAACACTGATGCGGTTTCTGTGTTGAGCTCTGTTTACAAGTCACTCCATCTTCAAGCAACCTCCGAAGAAAAATGGTACCCTCTGAATTTTGTCCTCGGGTGTTCATTCCTGATTTTCCTTCTGTCTAGCCGTTTTATTGGCAGAAGAAACAAAAAGCTCTTCTGGTTGCCAACTATTTCTCCTCTTGTATCGGTTATACTATCTACTTTAATTGTGTATTTGACAAAAGCTGATAAGCATGGTGTTATTATAATAACGCATGTCAAAGGAGGCCTGAATCCAATTTCAGCTCATGACCTACAATTCCATGGTCAACATGTTGGACAAGCAGCTAAAATTGGATTGATTTCTGCCATTATCGCTCTCACTGAAGCAATAGCTGTTGGGCGATCTTTTGCTTCCATTAAAGGATACCATCTAGATGGGAACAAAGAAATGTTAGCTATGGGCTTCATGAACATTGCGGGATCTTTAACCTCATGCTATCTGGCAACAGGTTCATTCTCAAGGACTGCGGTAAATTTCAGTGCTGGATGTCAAACAGCAGTATCAAATATTGTAATGGCAATTACTGTGCTTGTGTCACTGCAACTATTGACAAGGCTCTTGTACTATACTCCTGTGGCCATCCTTGCTTCAATCATCCTGTCTGCACTTCCTGGACTCATTGACATAAGCGAAGCTCGCTATATCTGGAAGGTTGACAAACTAGACTTTCTTGCCTGTATTGGGGCTTTCCTTGGCGTTTTGTTTGTATCAGTGGAGATTGGTCTTCTCGTTGCAGTAACAATATCGTTTGCAAAGATACTATTACAATCAATTCGGCCTGGGATAGAAGTTCTAGGTAGAGTTCCAAGAACAGAATCGTTTTGTGATGTCAGTCAATACCCCATGGCCTCAAGCACTCCAGGGATCTTGGCTATTCGCATCAGCTCGGGCTCTCTTTGCTTTGCAAATGCAAATTTTGTCAGAGAAAGAATACTCAAGTGGGTGACGAAAGAAGACGATGCCCTTAAAGAAAGTGCCAAGGGAAGGGTCCAAGCAGTAATCCTGGACATGACCAACCTTATGAACGTTGATACGTCGGGAATACTTGCACTGGAGGAACTGCAGAAGAGATTGGTTTCGCGTGGTGTACAATTAGCTATGGTGAACCCAAGGTGGCTGGTAATTCATAAGCTAAAACTGTCACACTTCGTGGATAAAATAGGGAAAGAATGGGTTTTTCTTACTGTTGGCGAAGCAATGGATGCATGTATCTCTTTTAAATTTGCTGTGAGCCCTTGA 1953 0.4311 MIGQEDTGQKERSQWILNSPNPPALWNKLFRTVKETISPHGSKLLSSSKKQTGHRHVVSFLQSLFPILVWFRNYKASKFKDDLLAGLTLASLSIPQSIGYANLAKLDPQYGLYTSVIPPLIYAVMGSSREIAIGPVAVVSLLLSSTIQKVIDPIANPDAYRRLVFTVTFFAGIFQAAFGIFRLGFLVDFLSHSALVGFMAGAAIVIGLQQLKGLLGIIHFTNNTDAVSVLSSVYKSLHLQATSEEKWYPLNFVLGCSFLIFLLSSRFIGRRNKKLFWLPTISPLVSVILSTLIVYLTKADKHGVIIITHVKGGLNPISAHDLQFHGQHVGQAAKIGLISAIIALTEAIAVGRSFASIKGYHLDGNKEMLAMGFMNIAGSLTSCYLATGSFSRTAVNFSAGCQTAVSNIVMAITVLVSLQLLTRLLYYTPVAILASIILSALPGLIDISEARYIWKVDKLDFLACIGAFLGVLFVSVEIGLLVAVTISFAKILLQSIRPGIEVLGRVPRTESFCDVSQYPMASSTPGILAIRISSGSLCFANANFVRERILKWVTKEDDALKESAKGRVQAVILDMTNLMNVDTSGILALEELQKRLVSRGVQLAMVNPRWLVIHKLKLSHFVDKIGKEWVFLTVGEAMDACISFKFAVSP 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1225 650 SUPERFAMILY SpoIIaa-like 524 641 IPR036513 -
Glsi08g1225 650 Gene3D STAS domain 497 643 IPR036513 -
Glsi08g1225 650 FunFam Sulfate transporter 31 497 644 - -
Glsi08g1225 650 ProSiteProfiles STAS domain profile. 534 641 IPR002645 -
Glsi08g1225 650 ProSitePatterns SLC26A transporters signature. 108 129 IPR018045 GO:0008271|GO:0008272
Glsi08g1225 650 PANTHER SULFATE TRANSPORTER 42 642 IPR001902 GO:0016020|GO:0055085
Glsi08g1225 650 Pfam Sulfate permease family 79 465 IPR011547 GO:0016020
Glsi08g1225 650 Pfam STAS domain 518 637 IPR002645 -
Glsi08g1225 650 CDD STAS_SulP_like_sulfate_transporter 518 634 - -
Glsi08g1225 650 NCBIfam sulfate permease 66 637 IPR001902 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1225 Glsi-ChrGlsi08 8882024 8884971 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1225 3 645 Inorganic Solute Cotransporters AT5G10180 65.271 0.0 858
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g1097 10 7353989 7357847 Glsi08g1225 08 8882024 8884971 CCT
Glsi08g1225 08 8882024 8884971 Glsi08g1225 08 8882024 8884971 ECH