Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1222 ATGTCCTCGTCGAATTCTCCGTGCGCAGCGTGCAAGATTCAGCGTCGGAAATGCACGCAGGATTGCGTGTTCGCACCGTATTTTCCGCCGGACAACCCTCAGAGGTTTGCCTGTGTCCACAAGGTATTTGGCGCAAGCAATGTGGCTAAGATTCTGAACGAGCTTAACGCGGCGCAGCGTGAGGACGCCGTCAAGTCTTTGGCTTACGAAGCGGAGGCCCGTCTCCGGGACCCAGTCTACGGTTGCGTGGGTCTCATCTCCGTCCTTCAACACAGGCTCAAGCAGTTGCAGATTGAACTGCTCGATGCCAGGAAAGAACTCGCCGCCTATATTGGACCTCAGGCTATGCTTCCCATTTTGTCTGCTGGGCTCATCACACAGCACCACCCCCACAACCCATCTTCTTCGTCTGTCGTTCCCTACAACAACATGCCTACGCAGCCGCCCATCATGGCAAATCCAACTCATCAGCACCAGATCTTCGATGCTCAGGCTCAGCAGTTGGCTGCGGCTATGGCGGCCGGGGACCAACGTCAGATGATGCAGCAAGAGCTTTTGAGGTTGAATGGTGGCTACGAGGGGGATTCGGCTTCATCTACGGGGTTCAACATCAACCAGATGTCTACTACTGCTTATGATATTCAGGCGCAGCTAATGCTCTCACCCCAGCACCCACAAACCACGGCAATGGTCGTTATCCCAGAGGCAGCCCAGGTCGAAAAACGAGGAGGGTAG 735 0.5524 MSSSNSPCAACKIQRRKCTQDCVFAPYFPPDNPQRFACVHKVFGASNVAKILNELNAAQREDAVKSLAYEAEARLRDPVYGCVGLISVLQHRLKQLQIELLDARKELAAYIGPQAMLPILSAGLITQHHPHNPSSSSVVPYNNMPTQPPIMANPTHQHQIFDAQAQQLAAAMAAGDQRQMMQQELLRLNGGYEGDSASSTGFNINQMSTTAYDIQAQLMLSPQHPQTTAMVVIPEAAQVEKRGG 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1222 244 Coils Coil 86 106 - -
Glsi08g1222 244 ProSiteProfiles LOB domain profile. 6 107 IPR004883 -
Glsi08g1222 244 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 153 - -
Glsi08g1222 244 Pfam Lateral organ boundaries (LOB) domain 7 101 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1222 Glsi-ChrGlsi08 8864126 8864860 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1222 1 203 AS2 family AT5G66870 55.459 6.01e-72 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Glsi08g1222 LOB 2.3e-41 No_clan