Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1213 ATGGCCAACAGAAGCATGGTTTCTCCTAATAGAGGTCAGGGGGGGTCACAGTATGTGCCTGTGTCTCTGGCGAGACAAGCTTCTCTGTATAACCGCACGTTTGATGAGGTTCATAGCCAATTGGGAAATACAGGGAAGCCTTTGTATAGTATGAATCTGGATGAGCTACTGAAAAATGTGATTTCAGCTGAAAGTGGACAGATTGTGCAAAACCCTTCCTCCTCTTCATCTGCTTCGTCTTTTCTAAGCAACCTAAATTTAAATGGGACTTTGAGTAAGAAAACCATTGATGAGGTCTGGAATGACATTCTTCACCAAGAACATGTCAACCGAATAGACAACCACTTGCAACAATCGAGTTTGGGGGAAACAACGCTGGCAGATTTTCTAGTTCGTGCCGGAGCCATTAACATAGGAAACCAAGATCGCATCATCACGGATGCCCAGCCATTGATGGCAATTGATCCAATGGTTTTGGTGTCACAGCAGGCAGATTGGTTGCCACTGCAAATGAAAATGCAAATGCAAATGCCTTCAGTTCACGACCAGCAGCAGCAGCAGATGAGAGGGCTATGCTCACATTTCAGTGTTTCTAAATCAGTTTCGGAAATTTGTTTCTCAGAGAGCCCGCTGGGAATCTCGTTGCCAATGGCGGCAGCGTTGGATTCCCAAGCAGCTGCAGTTGAAAGGAAGCGGCGTCACTCAGATGAGATGTTGGAAAAGAGTATAGAAAGGAGGCAGAAGAGGATGATCAAGAACCGGGAATCTGCTGCTAGATCGAGGGCAAGGAAGCAGGCCCACACAGATCATTTGGAGGAGGAAAAGTTTCGGTTGCAGCAAACAAATAGTTGGCTCAAAAAGCGTAAGGAAATAGAGGCACAGTTTACAAAACTCATTCCAAAGTACCAACTTCGGCGTACCAGCTCAGCCACATTCTAG 939 0.4601 MANRSMVSPNRGQGGSQYVPVSLARQASLYNRTFDEVHSQLGNTGKPLYSMNLDELLKNVISAESGQIVQNPSSSSSASSFLSNLNLNGTLSKKTIDEVWNDILHQEHVNRIDNHLQQSSLGETTLADFLVRAGAINIGNQDRIITDAQPLMAIDPMVLVSQQADWLPLQMKMQMQMPSVHDQQQQQMRGLCSHFSVSKSVSEICFSESPLGISLPMAAALDSQAAAVERKRRHSDEMLEKSIERRQKRMIKNRESAARSRARKQAHTDHLEEEKFRLQQTNSWLKKRKEIEAQFTKLIPKYQLRRTSSATF 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1213 312 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 243 288 IPR004827 GO:0003700|GO:0006355
Glsi08g1213 312 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 248 263 IPR004827 GO:0003700|GO:0006355
Glsi08g1213 312 SMART brlzneu 241 304 IPR004827 GO:0003700|GO:0006355
Glsi08g1213 312 MobiDBLite consensus disorder prediction 252 272 - -
Glsi08g1213 312 Pfam bZIP transcription factor 245 288 IPR004827 GO:0003700|GO:0006355
Glsi08g1213 312 CDD bZIP_plant_BZIP46 245 290 - -
Glsi08g1213 312 Gene3D - 243 297 - -
Glsi08g1213 312 SUPERFAMILY Leucine zipper domain 245 291 IPR046347 GO:0003700|GO:0006355
Glsi08g1213 312 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 23 310 IPR043452 GO:0003700|GO:0045893
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1213 Glsi-ChrGlsi08 8800167 8803434 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1213 22 312 bZIP Transcription Factor Family AT3G56850 40.656 1.87e-51 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Glsi08g1213 bZIP_1 1.3e-09 CL0018