Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1211 ATGAGTAATCTGAGGACGCTCTGTAGGCCTCAACCATTGTTCTCCTTCATTAGTTGCAGACAACAACTTCGATATAGGGCTTCATTTCGAAGCCCTAATTGTAAGTCTCGTTTGCCATCGCCATCACTCAATTCTAAATGGTTGGATCCCTCAGGTTCGAGTAGAATTGAGCTCCGGTTTCGCAGTTATCAGAGGAGAACTGTGGTCAGGGCATCGAACTGGACTGAACAAAAATCCCCATATGAAACTCTTGAATTAGAAAGAGATGCTGATGAGGAGCAGATAAAGAATGCATATAGGCGCTTGGCCAAATTTTATCATCCAGATGTCTATAATGGTAGAGGAACCCTTGAGGAAGATGAAACAGCAGAAGCTAGATTCATCAAGATTCAAGCTGCTTATGAATTACTTATAGATGACAAGAGGCGACGACGGTATGATATGGATAACCGAGTCAACCCAATGAAGGCATCTCAGGCATGGATGGAGTGGCTAATGAAAAAGCGAAAGGCTTTCTATCAGCGGGGTGATATGGCAGTTGCTGCTTGGGCGGAGCAGCAACAGCGGGAGTTAAATATTCGTGTGCGTGGTCTGTCTCGTTCAAAGATTGATCCAGAAGAAGAAAGGAAGATCTTGGCAAGAGAAAAGAAAGCATCAGCTAAGTATTTCTCCAATACCCTTAAGAGGCATACACTTGTATTGAAGAAAAGAGATTTAATGCGGAGAAAGGCTGAGGAAGAAAAAAAGAAGACTATCGGTCGACTGTTAGCTGCAGAGGGTCTTGAGCTCGATTCAGATAGTGATGACATTTGA 813 0.4342 MSNLRTLCRPQPLFSFISCRQQLRYRASFRSPNCKSRLPSPSLNSKWLDPSGSSRIELRFRSYQRRTVVRASNWTEQKSPYETLELERDADEEQIKNAYRRLAKFYHPDVYNGRGTLEEDETAEARFIKIQAAYELLIDDKRRRRYDMDNRVNPMKASQAWMEWLMKKRKAFYQRGDMAVAAWAEQQQRELNIRVRGLSRSKIDPEEERKILAREKKASAKYFSNTLKRHTLVLKKRDLMRRKAEEEKKKTIGRLLAAEGLELDSDSDDI 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1211 270 Coils Coil 81 101 - -
Glsi08g1211 270 PRINTS DnaJ domain signature 81 99 IPR001623 -
Glsi08g1211 270 PRINTS DnaJ domain signature 99 114 IPR001623 -
Glsi08g1211 270 PRINTS DnaJ domain signature 122 142 IPR001623 -
Glsi08g1211 270 CDD DnaJ 80 139 IPR001623 -
Glsi08g1211 270 PANTHER CO-CHAPERONE PROTEIN DJLA 60 261 - -
Glsi08g1211 270 SUPERFAMILY Chaperone J-domain 71 148 IPR036869 -
Glsi08g1211 270 ProSitePatterns Nt-dnaJ domain signature. 127 146 IPR018253 -
Glsi08g1211 270 Gene3D DnaJ domain 66 189 IPR036869 -
Glsi08g1211 270 FunFam Chaperone protein dnaJ 65 170 - -
Glsi08g1211 270 ProSiteProfiles dnaJ domain profile. 79 150 IPR001623 -
Glsi08g1211 270 SMART dnaj_3 78 142 IPR001623 -
Glsi08g1211 270 Pfam DnaJ domain 80 147 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1211 Glsi-ChrGlsi08 8783465 8791801 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1211 71 147 C2H2 Transcription Factor Family AT1G74250 37.662 4.18e-06 45.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g1211 08 8783465 8791801 Glsi08g1211 08 8783465 8791801 ECH