Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1203 ATGGCCTTACAAAACATTGGTGCTTCAAATCGTGATGATGCCTTCTATAGGTACAAGATGCCAAAAATGATAACCAAGATTGAAGGTAGAGGAAATGGCATCAGGACTAATGTTGTGAACATGGTTGACATTGCAAAGGCCCTGGCTAGACCTGCAGCTTACACTACAAAGTATTTTGGTTGTGAGCTTGGAGCCCAATCAAAATTTGATGAGAAGACTGGAATTTCTCTTGTGAATGGGGCCCATGACACTGCAAAGCTTGCGGGGTTACTTGAGAATTTCATTAAGAAATATGTTCAATGCTATGGTTGTGGGAACCCTGAAACTGAGATAGTTATCACAAAGACGCAAATGATCACCTTAAAGTGTGCTGCTTGTGGGTTTATCTCTGATGTTGATATGAGGGACAAGCTTACAACTTTTATAATCAAGAATCCACCTGAGCAGAAGAAGGGTCCCAAGGACAAGAAGGCCATGAGAAGGGCTGAAAAGGAGAGGCTTAAAGAGGGTGAGGCTGTTGATGAGGAGCTAAGGAAGCTTAAAAAGGAAGGCAAAAAGAAAAACACTGCAGTTAACTCAAAGGATGCTACTTCTAAAGCATCATCAAAGAAGAGAAACACTGGTTCTGATGAGGATCACTCCCCTGCTCACAGTCATGCTGATGAAAATGAGCTAGATGATGGTGATGATGATGGTGTACAATGGCAGACAGACACTTCATTGGAAGCGGCTCGTCAGCGCATCCAGGAGCAGCTAAGTGCTGTTACTGCTGATATGGTCATGCTTTCTACCAGCAATGAAGAAAAATTACCAAAACATGTTCCAGAGCATAAATCGACATCTGAGGTTAAGGAGCATGGCAACGGAGCAGTTGTTAGTACCCATGGGAGGCTTGTAGAGGAAATGAGGGACTATTTGAAGAAGAGCCCTTCTGCTGGTCAGCTTAAAACATTTATGGGTTCTCTCTCCGGCACACCTCAAGAGATTATTAATGCTTTACTTGAAGCTTTATTTAAGGATGTTGGCAAAGGATTTGCCAAAGTAGCTTCTAAAATGAAGAACTATCTTGCAATAGCCGCTCAATATGGAGGGTCACAAATGGTTTTGTTGCATGCTTTAGAATCTTTTTGTGGGAAAGCAAGCACGGAGGCAGTGAAGGAGGTTGCATTAGTCTTGAAGGAGCTCTATGACTGTGATGTGTTGGTGGAGGAGTCTATACTTCAATGGTATCGGCAAGGCTCGGTTGGCAGCAACAAGAGCTCACAAATCTGGAAGAATGTCAAACCCTTCATTGAATGGCTTGAAAATGCTGAGTCTGAATCCGAGGAAGAATAA 1335 0.4292 MALQNIGASNRDDAFYRYKMPKMITKIEGRGNGIRTNVVNMVDIAKALARPAAYTTKYFGCELGAQSKFDEKTGISLVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETEIVITKTQMITLKCAACGFISDVDMRDKLTTFIIKNPPEQKKGPKDKKAMRRAEKERLKEGEAVDEELRKLKKEGKKKNTAVNSKDATSKASSKKRNTGSDEDHSPAHSHADENELDDGDDDGVQWQTDTSLEAARQRIQEQLSAVTADMVMLSTSNEEKLPKHVPEHKSTSEVKEHGNGAVVSTHGRLVEEMRDYLKKSPSAGQLKTFMGSLSGTPQEIINALLEALFKDVGKGFAKVASKMKNYLAIAAQYGGSQMVLLHALESFCGKASTEAVKEVALVLKELYDCDVLVEESILQWYRQGSVGSNKSSQIWKNVKPFIEWLENAESESEEE 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1203 444 MobiDBLite consensus disorder prediction 143 234 - -
Glsi08g1203 444 Gene3D - 2 104 - -
Glsi08g1203 444 FunFam Eukaryotic translation initiation factor 5 105 145 - -
Glsi08g1203 444 Pfam Domain found in IF2B/IF5 11 127 IPR002735 GO:0003743|GO:0006413
Glsi08g1203 444 Gene3D - 293 444 - -
Glsi08g1203 444 CDD W2_eIF5 298 437 - -
Glsi08g1203 444 FunFam Eukaryotic translation initiation factor 5 1 104 - -
Glsi08g1203 444 Gene3D - 105 145 - -
Glsi08g1203 444 MobiDBLite consensus disorder prediction 148 223 - -
Glsi08g1203 444 SMART eIF2Bneu4 15 129 IPR002735 GO:0003743|GO:0006413
Glsi08g1203 444 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 10 101 IPR016189 GO:0003743|GO:0006413
Glsi08g1203 444 Pfam eIF4-gamma/eIF5/eIF2-epsilon 366 444 IPR003307 GO:0005515
Glsi08g1203 444 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 98 133 IPR016190 GO:0003743|GO:0006413
Glsi08g1203 444 ProSiteProfiles W2 domain profile. 284 444 IPR003307 GO:0005515
Glsi08g1203 444 MobiDBLite consensus disorder prediction 265 287 - -
Glsi08g1203 444 SMART 542_3 353 440 IPR003307 GO:0005515
Glsi08g1203 444 MobiDBLite consensus disorder prediction 269 284 - -
Glsi08g1203 444 SUPERFAMILY ARM repeat 297 438 IPR016024 -
Glsi08g1203 444 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 443 IPR045196 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1203 Glsi-ChrGlsi08 8750041 8751375 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1203 1 437 Eukaryotic Initiation Factors Gene Family AT1G77840 64.889 0.0 536