Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1192 ATGCATCACCTACCTCGATTTTTCAGTCATAGCAAGGAAACTAAGGGCATGGACCACAAGAAGTTCCAACGAAAACCGAAGCTCGAGCGCCGCAATGCCGCTAAGTACTTTGAATATGATGCTGGATCGTCTTCATCATCGCAGGACGACTCCGTTAGATCTCTCTATACTCGATCAATGGAGTTCGATAATCGAACCAGCTTCCGAATCGAGGGAGTTGAGGGTGAGTTTGATCGAATATGCAGGAATTTGGGGCTATCGGGACCAGAAGACTTCGCTATCCCGGCGGCGGCTTGGGAGGCTATGAAGATTAGATCGTCTTCGGATATTCTGCCAAGGTTGAAGCTGAACGAGTTGGATAGCCAGGAGAAGCTGGAGCTCAAAGAAAAAGAGGCGAATCAAGTAGTGTGTAAATTGGGTGACAAATTTGAAGAGAGGGTTACAACTAGAGACGTAGCTGAGTCAGCTGAAGAAGAGCCCGCTGAGAGTAGTGGGCGCTGCATTGCTGGTGGTGGTCTATGTGGAGTCGGTATCAAGGGTCTCCGTCCGCCAATGATTAAGCCACCGCCAGGGATGAGGCTTCCAGTTATTGATAATACATGCTCCACTTGGGATATTTTAAGGGATTTTGCTCCGCAAGGTGACATACACTCCTTGGAAAATTACGGGGACTTGAACTCTTCCGTTGATGACGAAGAAATACGGAGAAAACCGAAGAAAGCAGAAGTACAGAAAGAAGAAGAAGAAGAAGAAGAACGGAAAGTTGGTGGGGTTAGTCCGAAGGGAGAAGAGGAGAATAATGCGACAAAGCTCGCGAAAATTGTTGCTGAGCTTTCGGGCTCGAGTTCGTTTACTTCGTCAAATGAAGATGATTCTTCTAGCACTACCACGGGTCCTCCGTCGAATAATATATCTCCTAACGAAAGATTTAGACGAATTATTACGAACTGGCAAAAGGGTGAGCTTTTGGGACGTGGTTCGTTTGGGTCAGTCTATGAAGGAATTGCTGAAGATGGATTCTTTTTTGCTGTAAAAGAAGTTTCACTGCTTGATCAAGGATATCAGGGAAAGCAAAGTGTCTATCAACTAGAGCAGGAGATTGCTCTTTTGAGTCAGTTTGAACATGAGAATATTGTTCAATACTATGGCACAGAAATGGATGAATCAAAGCTGTATATCTTTCTTGAGTTGGTTACTAAAGGTTCCCTTGCAAGCCTCTACCGGAGGTACAACCTTCGAGACTCCCAGGTGTCTGCCTATACAAGGCAGATTCTGTATGGTTTGAAGTATCTTCATGATCGAAATGTGATTCACAGGGATATTAAATGTGCAAATATCTTGGTGGATGCAAATGGATCGGTCAAGCTTGCAGATTTTGGATTAGCAAAGGCAACCAAATTAAATGATGTTAAGTCGTGCAAAGGGACAGCGTTTTGGATGGCCCCTGAGGTTGTAAAAGGCAAGAATCGAGGTTATGGGATTCCGGCTGATATATGGAGTCTCGGGTGCACTGTTTTGGAGATGTTAACGGGCCAGATACCATACTCTCATCTGGAATGTATGCAGGCATTGTTTAGAATTGGAAAAGGTGAGCGCCCACCTGTTCCTGATTCTCTTTCTAAAGATGCACGGGATTTTATACTGCAGTGTCTTCAAGTCAATCCAGATGATCGTCCCACCGCTGCTCAGCTCTTAAACCATCCATTTGTTCGAAGGCCACTTTCCATGTCGTCTGGCTCTGCATCACCTTATATTCCGGGCAGATGGAGTTAA 1773 0.4523 MHHLPRFFSHSKETKGMDHKKFQRKPKLERRNAAKYFEYDAGSSSSSQDDSVRSLYTRSMEFDNRTSFRIEGVEGEFDRICRNLGLSGPEDFAIPAAAWEAMKIRSSSDILPRLKLNELDSQEKLELKEKEANQVVCKLGDKFEERVTTRDVAESAEEEPAESSGRCIAGGGLCGVGIKGLRPPMIKPPPGMRLPVIDNTCSTWDILRDFAPQGDIHSLENYGDLNSSVDDEEIRRKPKKAEVQKEEEEEEERKVGGVSPKGEEENNATKLAKIVAELSGSSSFTSSNEDDSSSTTTGPPSNNISPNERFRRIITNWQKGELLGRGSFGSVYEGIAEDGFFFAVKEVSLLDQGYQGKQSVYQLEQEIALLSQFEHENIVQYYGTEMDESKLYIFLELVTKGSLASLYRRYNLRDSQVSAYTRQILYGLKYLHDRNVIHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCKGTAFWMAPEVVKGKNRGYGIPADIWSLGCTVLEMLTGQIPYSHLECMQALFRIGKGERPPVPDSLSKDARDFILQCLQVNPDDRPTAAQLLNHPFVRRPLSMSSGSASPYIPGRWS 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1192 590 Pfam Protein kinase domain 318 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi08g1192 590 MobiDBLite consensus disorder prediction 281 309 - -
Glsi08g1192 590 ProSitePatterns Protein kinases ATP-binding region signature. 323 345 IPR017441 GO:0005524
Glsi08g1192 590 SUPERFAMILY Protein kinase-like (PK-like) 292 576 IPR011009 -
Glsi08g1192 590 ProSitePatterns Serine/Threonine protein kinases active-site signature. 436 448 IPR008271 GO:0004672|GO:0006468
Glsi08g1192 590 MobiDBLite consensus disorder prediction 7 27 - -
Glsi08g1192 590 FunFam Mitogen-activated protein kinase 1, putative, expressed 315 582 - -
Glsi08g1192 590 ProSiteProfiles Protein kinase domain profile. 317 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi08g1192 590 SMART serkin_6 317 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi08g1192 590 Gene3D Transferase(Phosphotransferase) domain 1 314 582 - -
Glsi08g1192 590 MobiDBLite consensus disorder prediction 1 27 - -
Glsi08g1192 590 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 66 583 - -
Glsi08g1192 590 MobiDBLite consensus disorder prediction 216 267 - -
Glsi08g1192 590 MobiDBLite consensus disorder prediction 228 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1192 Glsi-ChrGlsi08 8661595 8668719 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1192 27 574 MAP Kinase Kinase Kinase AT4G08500 52.525 4.77e-180 520
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Glsi08g1192 Pkinase 4.1e-70 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g1192 08 8661595 8668719 Glsi08g1192 08 8661595 8668719 ECH