Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1188 ATGGCGGCTTCCGTGGATAACCGTCAATACGCGGGCTTCCAACCTCCGTTGAACGGCGTCATTTGCTCGTTCAACCCCGCCGCCGACTCCCCGACTCGCGGTTGTAACTTCCACTCCAATCCCAAGAGTAGTTCAGAACCTTTGCTGCCGGATTTAGATTCTTCCAGCGAAGACGAATATGAGATTGACCATTGGCAAAACCTGATACGAAAGGCAAGCTCCGAAGTGGAGTCCTCCATCATGGACCCTCGCGACGAAGGAAGTGCTGATAACTGGATCCAACGCAACGCTTCCCTGGTCCGTCTCACAGGGAAACATCCCTTCAACTCCGAGCCACCTCTGACCCGGCTCATGCACCACGGCTTCATCACCCCGGTCCCACTTCACTACGTGCGCAACCACGGCCCCGTCCCAAAAGCCCGCTGGGAGGAATGGAGCGTTGAGGTTTGTGGATTGGTGAAGCGACCAACCCGGTTCACCATGGACCAACTGGTGAACGAGTTCCCAAGCCGCGAGTTCCCGGTGACGCTGGTTTGCGCAGGGAACCGACGTAAGGAACAAAACATGGTGAAACAGAGCATCGGTTTTAACTGGGGAGCGGCTGCGGTTTCTACTTCGGTGTGGCGAGGTGTATCGCTGCGGTACGTGCTGAAGCAGTGTGGCATCTTCGGCCGATCCGAAGGGGCCCTCCATGTGTGCTTCGAAGGGGCTGAGGAATTGCCAGGCGGCGGTGGGTCCAAGTACGGTACCAGCATCAACAGGGAGATAGCAATGGATCCATCCCGTGACATAATGGTAGCATACATGCAAAACGGGGAGCTATTGGCGCCGGATCACGGGTTCCCAGTACGGATGATCATACCGGGTTTCATTGGGGGTCGTATGGTGAAATGGCTGAAGCGCATCATTGTAACAACCCACCAATCAGACAGTTACTACCATTACAAGGACAACAGAGTACTTCCCTCCCACGTTGATGCCGAGCTTGCTAATGCTCAAGCTTGGTGGGATAAGCCAGAGTATATTATCAACGAGCTAAACATAAACTCGGTGATGACGACGCCGAGTCACGAGGAGATCTTGCCCATAAACTCGTGGACTGTTCAGAGGCCTTATGTGTTGAGAGGCTACGCATATTCCGGAGGTGGGAGAAAAGTGACACGTGTGGAGGTGACGATGGACGGTGGGGAGACGTGGCAAGTGTGCAGTTTGGACCGCCCAGAGAAACCTAACAGATACGGGAAGTACTGGTGCTGGTGCATCTGGTCCTTGGAGGTGGAGGTGCTGAACCTACTTGCAGCCAAGGAGATTGCAGTGCGTGCCTGGGATGAGGCCCTCAACACCCAGCCTCATAAACTCATTTGGAATCTTATGGGAATGATGAACAACTGCTGGTTCAGGGTTAAAATCAATGTGTGCAAGCCCCACAAGGGTGAGATAGGATTAGTGTTCGAGCACCCAACCCTACCAGGCAACCAATCCGGTGGCTGGATGGCCAGGGAACGACAAGTCGAGAAGTCATCAGAGTCCAACCAAACCCTCAAGAAGAGCGTCTCAACACCCTTCATGAACACTGCCTCTAATATCTACACAATCTCTCAAGTCAAAAGCCACAGCACCCCCGACTCTGCTTCGATCATCGTTCACGGCAACGTCTACGATTGCACCTGCTTCCTCAAAGATCACCCCGGCGGCTCCGACAGCATTCTGATCAACGCCGGCACCGACTGCACCGAGGAGTTCGACGCCATCCATTCCGACAAAGCCAAGAAAATGCTCGAGGATTACCGAATCGGCGAGCTCATGACCACCGGTTACACATCCGACTCCTCCGCTTCCTCGCCCAATAACTCCGTGCGTGGCAATCCCGACACCACCGATTTGGCCCCCACCAAGGAAGTCACACCATCACTACGTAGCGTGGCTCTTAATCCCCGTGAAAAAATCCCATGCAAACTCGTGTCCAAAACGTCCATCTCCCACGACGTCAGGCTCTTCCGCTTTGCGTTACCTTGTGAGGAACAGGTCATGGGTTTGCCAGTAGGAAAGCACATATTCCTATTTGCTACCATTGACGATAAGCTTTGCTTGCGAGCTTACACTCCAACCAGCAGCGTTGATGAAGTAGGTTTCTTCGATCTCGTTGTGAAGATTTATTTCAAAGGTGTTCATCCCAAGTTTCCTAATGGTGGACTCATGTCTCAGCACTTAGACTCGTTACCGATAGGCGCTGTTTTGGACGCGAAGGGTCCAGTAGGCCACATAGAGTACACTGGCAGAGGCAACTTCTTGGTTCAAGGCAAACACAAGTTTGCTAAGAAGTTAGCCTTGCTGGCCGGTGGGACTGGTATCACACCCATTCACCAGGTGGCTCAAGCGATTTTGAAGGACCCAGAGGACCAGACTGAAATGCAGGTGGTGTACGCGAACCGGACGGAAGATGATATTTTGGTGAGAGAGGAGCTAGATGCGTGGGCTGAGAAGCATGATGGGAGGTTCAAGGTGTGGTACGTGGTACAAGAAACCAAAAGGAAAGGGTGGGAATACAGTGTGGGGTTCATCACGGAGAGTGTGCTGAGGGAGCATATTCCAGAAGCATCCGACGATACGTTGGCATTGGCTTGTGGGCCACCACCCATGATTCAGTTCGCTGTGCAGCCGAATTTGGAGAAGATAGGGTATGACATCAAGAACAATCTACTTGTGTTTTAG 2712 0.5291 MAASVDNRQYAGFQPPLNGVICSFNPAADSPTRGCNFHSNPKSSSEPLLPDLDSSSEDEYEIDHWQNLIRKASSEVESSIMDPRDEGSADNWIQRNASLVRLTGKHPFNSEPPLTRLMHHGFITPVPLHYVRNHGPVPKARWEEWSVEVCGLVKRPTRFTMDQLVNEFPSREFPVTLVCAGNRRKEQNMVKQSIGFNWGAAAVSTSVWRGVSLRYVLKQCGIFGRSEGALHVCFEGAEELPGGGGSKYGTSINREIAMDPSRDIMVAYMQNGELLAPDHGFPVRMIIPGFIGGRMVKWLKRIIVTTHQSDSYYHYKDNRVLPSHVDAELANAQAWWDKPEYIINELNINSVMTTPSHEEILPINSWTVQRPYVLRGYAYSGGGRKVTRVEVTMDGGETWQVCSLDRPEKPNRYGKYWCWCIWSLEVEVLNLLAAKEIAVRAWDEALNTQPHKLIWNLMGMMNNCWFRVKINVCKPHKGEIGLVFEHPTLPGNQSGGWMARERQVEKSSESNQTLKKSVSTPFMNTASNIYTISQVKSHSTPDSASIIVHGNVYDCTCFLKDHPGGSDSILINAGTDCTEEFDAIHSDKAKKMLEDYRIGELMTTGYTSDSSASSPNNSVRGNPDTTDLAPTKEVTPSLRSVALNPREKIPCKLVSKTSISHDVRLFRFALPCEEQVMGLPVGKHIFLFATIDDKLCLRAYTPTSSVDEVGFFDLVVKIYFKGVHPKFPNGGLMSQHLDSLPIGAVLDAKGPVGHIEYTGRGNFLVQGKHKFAKKLALLAGGTGITPIHQVAQAILKDPEDQTEMQVVYANRTEDDILVREELDAWAEKHDGRFKVWYVVQETKRKGWEYSVGFITESVLREHIPEASDDTLALACGPPPMIQFAVQPNLEKIGYDIKNNLLVF 903
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1188 903 PRINTS Cytochrome B5 reductase signature 677 688 - -
Glsi08g1188 903 PRINTS Cytochrome B5 reductase signature 814 825 - -
Glsi08g1188 903 PRINTS Cytochrome B5 reductase signature 871 879 - -
Glsi08g1188 903 PRINTS Cytochrome B5 reductase signature 776 795 - -
Glsi08g1188 903 PRINTS Cytochrome B5 reductase signature 698 705 - -
Glsi08g1188 903 PRINTS Cytochrome B5 reductase signature 743 757 - -
Glsi08g1188 903 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 646 758 IPR017927 GO:0016491
Glsi08g1188 903 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 527 604 IPR036400 -
Glsi08g1188 903 Pfam Oxidoreductase NAD-binding domain 777 885 IPR001433 GO:0016491
Glsi08g1188 903 Gene3D - 753 903 IPR039261 -
Glsi08g1188 903 PANTHER SULFITE REDUCTASE 74 475 - -
Glsi08g1188 903 CDD eukary_NR_Moco 85 470 - -
Glsi08g1188 903 MobiDBLite consensus disorder prediction 33 51 - -
Glsi08g1188 903 PRINTS Eukaryotic molybdopterin domain signature 122 138 IPR008335 GO:0016491
Glsi08g1188 903 PRINTS Eukaryotic molybdopterin domain signature 175 186 IPR008335 GO:0016491
Glsi08g1188 903 PRINTS Eukaryotic molybdopterin domain signature 440 452 IPR008335 GO:0016491
Glsi08g1188 903 PRINTS Eukaryotic molybdopterin domain signature 276 289 IPR008335 GO:0016491
Glsi08g1188 903 PRINTS Eukaryotic molybdopterin domain signature 201 216 IPR008335 GO:0016491
Glsi08g1188 903 PRINTS Eukaryotic molybdopterin domain signature 415 425 IPR008335 GO:0016491
Glsi08g1188 903 PRINTS Eukaryotic molybdopterin domain signature 259 275 IPR008335 GO:0016491
Glsi08g1188 903 PRINTS Eukaryotic molybdopterin domain signature 453 466 IPR008335 GO:0016491
Glsi08g1188 903 PRINTS Eukaryotic molybdopterin domain signature 343 355 IPR008335 GO:0016491
Glsi08g1188 903 PRINTS Eukaryotic molybdopterin domain signature 374 388 IPR008335 GO:0016491
Glsi08g1188 903 PRINTS Eukaryotic molybdopterin domain signature 186 198 IPR008335 GO:0016491
Glsi08g1188 903 PRINTS Eukaryotic molybdopterin domain signature 388 400 IPR008335 GO:0016491
Glsi08g1188 903 PRINTS Eukaryotic molybdopterin domain signature 292 305 IPR008335 GO:0016491
Glsi08g1188 903 PRINTS Eukaryotic molybdopterin domain signature 100 114 IPR008335 GO:0016491
Glsi08g1188 903 FunFam Nitrate reductase 86 335 - -
Glsi08g1188 903 Pfam Oxidoreductase FAD-binding domain 651 757 IPR008333 -
Glsi08g1188 903 CDD cyt_b5_reduct_like 651 903 - -
Glsi08g1188 903 Gene3D - 524 604 IPR036400 -
Glsi08g1188 903 PIRSF Nitr_rd_NADH 25 902 IPR012137 GO:0006809|GO:0042128|GO:0050464
Glsi08g1188 903 PRINTS Cytochrome B5 signature 562 576 IPR001199 -
Glsi08g1188 903 PRINTS Cytochrome B5 signature 589 601 IPR001199 -
Glsi08g1188 903 PRINTS Cytochrome B5 signature 577 584 IPR001199 -
Glsi08g1188 903 PRINTS Cytochrome B5 signature 552 562 IPR001199 -
Glsi08g1188 903 Gene3D - 84 336 IPR036374 -
Glsi08g1188 903 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 746 897 IPR039261 -
Glsi08g1188 903 SUPERFAMILY E set domains 345 472 IPR014756 -
Glsi08g1188 903 MobiDBLite consensus disorder prediction 33 55 - -
Glsi08g1188 903 Pfam Cytochrome b5-like Heme/Steroid binding domain 532 601 IPR001199 -
Glsi08g1188 903 FunFam Sulfite oxidase, mitochondrial 525 605 - -
Glsi08g1188 903 Gene3D - 345 521 - -
Glsi08g1188 903 FunFam Nitrate reductase [NADH] 753 903 - -
Glsi08g1188 903 FunFam NADH-cytochrome b5 reductase 637 752 - -
Glsi08g1188 903 ProSitePatterns Eukaryotic molybdopterin oxidoreductases signature. 151 186 IPR022407 GO:0043546
Glsi08g1188 903 Pfam Mo-co oxidoreductase dimerisation domain 341 472 IPR005066 GO:0016491|GO:0030151
Glsi08g1188 903 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 558 565 IPR018506 GO:0020037
Glsi08g1188 903 Gene3D Translation factors 638 752 - -
Glsi08g1188 903 FunFam Nitrate reductase 345 521 - -
Glsi08g1188 903 MobiDBLite consensus disorder prediction 607 631 - -
Glsi08g1188 903 SUPERFAMILY Oxidoreductase molybdopterin-binding domain 83 343 IPR036374 -
Glsi08g1188 903 SMART Cyt_b5_2 530 602 IPR001199 -
Glsi08g1188 903 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 527 602 IPR001199 -
Glsi08g1188 903 SUPERFAMILY Riboflavin synthase domain-like 639 758 IPR017938 -
Glsi08g1188 903 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 561 571 IPR001709 GO:0016491
Glsi08g1188 903 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 776 795 IPR001709 GO:0016491
Glsi08g1188 903 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 871 879 IPR001709 GO:0016491
Glsi08g1188 903 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 814 825 IPR001709 GO:0016491
Glsi08g1188 903 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 847 863 IPR001709 GO:0016491
Glsi08g1188 903 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 802 811 IPR001709 GO:0016491
Glsi08g1188 903 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 698 705 IPR001709 GO:0016491
Glsi08g1188 903 Pfam Oxidoreductase molybdopterin binding domain 134 313 IPR000572 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1188 Glsi-ChrGlsi08 8645449 8649586 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1188 639 894 NADPH P450 reductases AT5G17770 38.132 5.03e-48 170
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g1188 08 8645449 8649586 Glsi08g1188 08 8645449 8649586 ECH