Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1154 ATGTTGGTATTATTTTTAAACCTAATTTACTCAAAGGAACTCTCTAAACTCAGTTTAGGGAGGTGGTTGAACAACGCAAAGCCTTATTTGTTAATGGTGGGATTACAATTTGGGTTTGCCGGAACGGTGCTCTTCAGCATGGCCAGTATCAACCTTGGAATGAATCGTTTTGTGTTCAGTGCCTACCGCAATGCATTTGCTGCATTTACCCTGGCTCCTTTTGCATTCATTCTTGAAAGGAAAATTAGGCCCAAGATGACAGTCTCTGTATTTTTACAGATAATGGCACTCGGTTTTCTGGAGCCAGTGGTTGACCAAGGCTTTACCTTCTTGGGGATGCAGTACACTTCGGCAACATTTACATCCGCTATTCTGAACACTGTGCCCTCTATCACCTTCGTGCTTGCATTAATGCTTGGCTTAGAGCGGGTAAAGATGAAGAAGGTACGCAGTCAAGCGAAGGTGATTGGAACATTGGTAACATTTGCAGGCACTTTGCTAATGACACTTTACAAAGGTCCTCTGATCCACCTATTTCATTCTTCAAATACAAGCAAGCAGCAAGATGGTCATGGAAGCCAGTCCCTTCACAAACACTGGGTCACGGGCACACTTTTCCTACTCCTGGGTTGTTCTGCTTGGTCTTCTTTCTTCATTTTGCAGTCCATAACGGTGAAAAGGTACCCGGCGGAACTGTCACTTGCGTGCTTGATATGCTCAGTGGGTGCTGTGCAAAGTGCAGCGGTGGCGCTTGTGATGGAGCATCACTCTCGCTCATGGTCTATTGCATGGGACTGCACCCTCTTTGCTCCACTTTATGCGGGAATAGTTGGGTCAGGAGTTGCGTATTACGTGCAAGGAGTGGTGTTGCAAAGCAGAGGTCCAGTGTTTGTAACGGCCTTTTATCCACTTTGTATGGTCATCGTTGCTGCTTTGGGCTCCTTCATTCTAGCCGAACAACTCCACCTGGGAAGTATCATTGGGGGCATCATTATCGCAGCGGGTCTTTACTCTGTTGCGTGGGGAAAAGGCAAAGACAATTTAGACCCCACACCCCCATTACCATTACCATCACCATCACCATCACCAGGATCAGCAAAACAAACACAAGAGCTGCCAATGACCTCAACTGATATTTCCAAGATGGATCCCACTGATAAAACCATTTATCACCAAGATATCTAA 1185 0.4591 MLVLFLNLIYSKELSKLSLGRWLNNAKPYLLMVGLQFGFAGTVLFSMASINLGMNRFVFSAYRNAFAAFTLAPFAFILERKIRPKMTVSVFLQIMALGFLEPVVDQGFTFLGMQYTSATFTSAILNTVPSITFVLALMLGLERVKMKKVRSQAKVIGTLVTFAGTLLMTLYKGPLIHLFHSSNTSKQQDGHGSQSLHKHWVTGTLFLLLGCSAWSSFFILQSITVKRYPAELSLACLICSVGAVQSAAVALVMEHHSRSWSIAWDCTLFAPLYAGIVGSGVAYYVQGVVLQSRGPVFVTAFYPLCMVIVAALGSFILAEQLHLGSIIGGIIIAAGLYSVAWGKGKDNLDPTPPLPLPSPSPSPGSAKQTQELPMTSTDISKMDPTDKTIYHQDI 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1154 394 MobiDBLite consensus disorder prediction 350 394 - -
Glsi08g1154 394 MobiDBLite consensus disorder prediction 363 383 - -
Glsi08g1154 394 Pfam EamA-like transporter family 202 339 IPR000620 GO:0016020
Glsi08g1154 394 Pfam EamA-like transporter family 28 169 IPR000620 GO:0016020
Glsi08g1154 394 PANTHER WAT1-RELATED PROTEIN 27 347 IPR030184 GO:0016020|GO:0022857
Glsi08g1154 394 SUPERFAMILY Multidrug resistance efflux transporter EmrE 260 345 - -
Glsi08g1154 394 SUPERFAMILY Multidrug resistance efflux transporter EmrE 62 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1154 Glsi-ChrGlsi08 8447235 8452243 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1154 20 378 Nodulin-like Gene Family AT4G08300 46.814 1.46e-118 347