Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1153 ATGGAGTATGTGTCTACAGCTGCACATATAGGAGGATGTCAAGTTATAGGTATTATTCTTACAGCTCTAACTGCGTCCAACATCGTAAGAAAGACAATTGGGGAAAAGTTTAGAGTAGTTTCCATGTATAAGCACATGGCTAAAATGATGAGCAATGCTGATACCTTCATTGCCTTATCAAGTGGTTTTGAACAAAAGTTCATTTCACACTCAGCACGACGAATTCTCATCTCAACTTCAAATGCTGAGGAGTTGATTGATGTTTTACAAGCATATATTCATGTACCTAATCCAACTATGATTCGAATAGATTGGAAGACAAACAACCATGGAAAGCATAAGTTAGATTTGGATCTTCATCTTTTTGGTTGGATGACGCAGCCTGGTTTGCTTAAGATGTCTGGTGGTTTAGCTTTGATCATATCCAGGGCATCCGTGCTCCCTACCCCTTTGGAAAGGTTGATATCTTCTGGTATAAAGCCCATTGCGGGCCCAGGTTTTTCAATGTTGGCCGCCTCTGCAATTAACATGGCTACTCCTGCTGTCTCCTCTACTAGGTTGTCTAGGATGCTGAATTTGGATGGACCTGGTTTGTCTCTCAGGCCAATTCTGCCCTTGCATTTGCTTGAGATTCATGGACTCGTGTTCAACCAAGAGAGGGGTATCCACGGTATTGCTCTTCAAACACGTGATGGAGATGCCTTTGGATTAAGGCTACAGTCCCTCCTATATATTAAGAAGGATATGCTTGGTCTCGCATTCAGTCCCACACAAAGCCGTTTCAGTTCTCCTAAGCAAGAGATAGAAAGAGAAACAAAGATGGGTGTGATGACATATTGTGAGAAGACAGGCGCTTGGTTGAAGAAGGCAAAGCCTTATCTGCTGATGCTGGGCATGCAATTCGGGTCTGCGGGAATGTACATTTTCATCATGGATGCCTTGAATAAGGGGATGAGCCATTTTGTGCTCATCGTCTACCGAAATGCCTTCGCCGCTTTGACTCTTGCCCCCTTCGCCCTTGTTCTTGAAAGGAAAGTTAGGCCCAAGATGACTGTCCGGATTTTTTCGGAGATTGTAGCGCTCGGTTTTCTTGAGGTAGTCCTAGATCAGGGCTTCGTCCTCTTGGGGATGAAATTAACGTCGGCATCTTTCACATCTGCTGTGACCAACTGCGTACCCTCTATTACCTTTGCGCTCGCCGTCATTTTTCGATTAGAGCCGATGAAGATCAAGGAGACACGATGCCAAGCCAAAGTGTTAGGGACTGCAGTAACTCTTGGGGGCGCTTTCCTAATGGCACTGTACAAAGGTCCCGTAGTTGATGTTGTGGGTTCATCAAGCAGCCATGGGAGTCACCACCAGAATGTGAACGACCATTCGGCCAAACAATGGGTTATTGGCACGTTTCTCCTCATCATAGGTTCTACGGCCTTCTCTGCTTTCTACATTTTGCAAGCCATAACTTTAAGAAAGTACCCAGCAGAGATGTCTCTGTCCACCTGGATTTGCTTTGTGGGCATATTTCAAAGCGCCGTAGTCGCTGCTGTGGCGGAGCGCCACCGGGGCCCTCATGCCTGGTCTCTTGGCTGGGATTCCAGGTTCTTTGCTCCTGCTTACTCGGGAATAGTATCTTCGGGAATCCAATATTACGTGCAAGGCCTGGTTATGAGCACCATGGGCCCCGTGTTTGCGACTGCTTTTAACCCTCTGCGTATGGTCATCGTGACGGTCCTGGCTTGCATCGTCCTGTCTGAGCAACTCTACCTGGGCAGTATCATTGGAGGAGTAATCGTGACTGTGGGGCTTTATCTAGTTGTATGGGGGAAATCTAAAGAAGCTAAAGGTATGAATATGCCCTCCCCAGCAAAGGACAGCTCCCAAGGGCAAGAGCAGCTACCTGTAACGGACCCCACAAATGATAATAAAGCTGAATTGGTGATAATTGGTGATAAAAACAACCAAGTGGAAGAAGCCTGA 1977 0.4643 MEYVSTAAHIGGCQVIGIILTALTASNIVRKTIGEKFRVVSMYKHMAKMMSNADTFIALSSGFEQKFISHSARRILISTSNAEELIDVLQAYIHVPNPTMIRIDWKTNNHGKHKLDLDLHLFGWMTQPGLLKMSGGLALIISRASVLPTPLERLISSGIKPIAGPGFSMLAASAINMATPAVSSTRLSRMLNLDGPGLSLRPILPLHLLEIHGLVFNQERGIHGIALQTRDGDAFGLRLQSLLYIKKDMLGLAFSPTQSRFSSPKQEIERETKMGVMTYCEKTGAWLKKAKPYLLMLGMQFGSAGMYIFIMDALNKGMSHFVLIVYRNAFAALTLAPFALVLERKVRPKMTVRIFSEIVALGFLEVVLDQGFVLLGMKLTSASFTSAVTNCVPSITFALAVIFRLEPMKIKETRCQAKVLGTAVTLGGAFLMALYKGPVVDVVGSSSSHGSHHQNVNDHSAKQWVIGTFLLIIGSTAFSAFYILQAITLRKYPAEMSLSTWICFVGIFQSAVVAAVAERHRGPHAWSLGWDSRFFAPAYSGIVSSGIQYYVQGLVMSTMGPVFATAFNPLRMVIVTVLACIVLSEQLYLGSIIGGVIVTVGLYLVVWGKSKEAKGMNMPSPAKDSSQGQEQLPVTDPTNDNKAELVIIGDKNNQVEEA 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1153 658 MobiDBLite consensus disorder prediction 616 658 - -
Glsi08g1153 658 PANTHER WAT1-RELATED PROTEIN 291 620 IPR030184 GO:0016020|GO:0022857
Glsi08g1153 658 SUPERFAMILY MCP/YpsA-like 1 92 - -
Glsi08g1153 658 Pfam EamA-like transporter family 292 432 IPR000620 GO:0016020
Glsi08g1153 658 Pfam EamA-like transporter family 466 606 IPR000620 GO:0016020
Glsi08g1153 658 Gene3D - 1 90 - -
Glsi08g1153 658 MobiDBLite consensus disorder prediction 620 638 - -
Glsi08g1153 658 SUPERFAMILY Multidrug resistance efflux transporter EmrE 528 611 - -
Glsi08g1153 658 SUPERFAMILY Multidrug resistance efflux transporter EmrE 326 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1153 Glsi-ChrGlsi08 8427098 8441111 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1153 287 658 Nodulin-like Gene Family AT2G37460 45.040 1.21e-108 331