Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1152 ATGGGAGACGAAACATGCGGGAGGTTACGCTTAATGATGAAAAATGCAAAACCTTATTTGCTAATGATAGTCATACAGTTTGGGTCGGCTGGAATGTACATCATCACCATGTCTACCTTTAGCCATGGCATGAGTCGCTATGTTTTCATTGTGTACCGCAATGCCATGGCTGCTCTTATTTTCGGTCCTTTTGCTTTCTTTCTTGAAAGGGTGATACTGGACCAAGGCTTCTCTTTTCTCGGGATGGTGTACACGTCAGCAACGTATACGTCTGCCATTATGAATGCCCTACCCTCTATCACGTTTCTCATGGCTGTCATTCTAAGGATGGAGCGTGTAAGGATAAAGGAGGTGAGGAGTCAAGTCAAGGTCATCGGAACTGTATTAAGCTTTGGAGGTGCTCTGCTCATGACTCTTTACAAAGGCCCCATGCTTGATATACTTGGGTCGTCCTATGACCATAGCCACCATCAAATTAGCGCCAACTCCTCCAGCCATAGGTGGATTTTGGGCACAGTTTTTATCTTAATAGCTTGTGTCGCCTTTTCAGCTTTCTACATAGTACAGTCTATGGTGCTGAAGTTATACCCAGCAGAAATGTCTCTCGTTAGCTTGATATGCTTTGTGGGAACAATAGAAGCTGTAGGTATAGCAATTGCGATCGAGCATAATCCTCGCGCATGGGCTCTCGGTTGGGACTCTAGGCTTTTAGCTCCACTCTATTCGGGAGTGGTAACCACAGGAATTATGTTCTACGTGCAAGGACTGGTGATGCGAACCAGAGGGCCTGTATTTGTGACGGCCTTTAATCCTCTCCGCATGATCATTGTGGCCATTTTAGCCATGGCTATTCTGGGTGAGAAACTCTACCTAGGAAGTGTTATTGGAAGCGTCGTAGTTGCTGTCGGACTGTACGCTGTTTTATGGGGCAAAAGCAAGGATAGTATTGACAACAAGTCCACAACTACCGAGACACAGGCCGATCCCAAAACACAGCAACTGCCAGTAACTCTGCCGGCCAAAGCCCAACAACAGCAAATGGAGTCTACAGACCCTGTCACCCACTGA 1068 0.4654 MGDETCGRLRLMMKNAKPYLLMIVIQFGSAGMYIITMSTFSHGMSRYVFIVYRNAMAALIFGPFAFFLERVILDQGFSFLGMVYTSATYTSAIMNALPSITFLMAVILRMERVRIKEVRSQVKVIGTVLSFGGALLMTLYKGPMLDILGSSYDHSHHQISANSSSHRWILGTVFILIACVAFSAFYIVQSMVLKLYPAEMSLVSLICFVGTIEAVGIAIAIEHNPRAWALGWDSRLLAPLYSGVVTTGIMFYVQGLVMRTRGPVFVTAFNPLRMIIVAILAMAILGEKLYLGSVIGSVVVAVGLYAVLWGKSKDSIDNKSTTTETQADPKTQQLPVTLPAKAQQQQMESTDPVTH 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1152 355 SUPERFAMILY Multidrug resistance efflux transporter EmrE 230 312 - -
Glsi08g1152 355 MobiDBLite consensus disorder prediction 317 355 - -
Glsi08g1152 355 PANTHER WAT1-RELATED PROTEIN 17 321 IPR030184 GO:0016020|GO:0022857
Glsi08g1152 355 Pfam EamA-like transporter family 170 308 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1152 Glsi-ChrGlsi08 8422158 8423829 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1152 13 352 Nodulin-like Gene Family AT1G44800 42.659 3.86e-104 309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g1152 08 8422158 8423829 Glsi08g1152 08 8422158 8423829 ECH