Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1151 ATGGGAGACCAAGATGTTAGTGGCTCGTTTAGCAAGACGCTCCGCAAGGTGAAACCTTACCTTGCTATGATCTCCCTTCAGTTTGGCTACTCAGGGATGTACATCATCACCATGGTTTCTTTTAAGCATGGCATGAGCCATTGGGTTCTCTCTGTCTACCGTCATGTAGTTGCCTTTCTTCTCATTGCCCCTTTTGCCTTTGTCCTTGAAAGAAAAATAAGGCCAAAGATGACTCTTCCCATCTTCCTGAGGATAGTGGCGCTTGGTTTCCTTGAGCCAGTGCTCGATCAGAACCTGTACAATATGGGGATGAAAAACACCTCAACAACTTTTGCAGCTGCCAGCGTTAATGTCCTCCCAGCCATCACTTTTGTAATGGCCCTCATTTTCAGGTTAGAGAAAGTCAACTTCAAAAAATTTCACAGCGCAGCCAAGGTAATGGGAACTGTAATAACAGTGTCAGGAGCCATGGTTATGACTTTGTTCAAAGGCCCAGCCTTTGAAATCATAAAGGGAAGAGCAGGGAGCCACCATAATGGTGCCAGCAGCGAGCCTTCTGAACAGCATTGGGTGCTTGGTACACTCATGCTCATAGCAAGTTGCGGTGGCTGGGCTGGCTTCTTCATTTTGCAATCATTTACTTTGAAGAAGTACCCGGCAGAGCTGTCGCTTACAGCTTGGATTTGCTTGTTGGGTATCTTCGAGGGTTCAATCGCATCTCTTATTATGGAAAGGGGCATAAGTGTCTGGGTCATAGGCTGGGACTCGCGACTCCTCGCTTGCGTTTATTCTGGGGTGGTATGCTCTGGAATGGCCTATTATGTACAAGGAGTTGTGACGAGGGAACGTGGACCAGTGTTTGTGACTTCTTTCAGCCCACTATGTATGATTATCACTGCTGCGTTGGGCTCCCTTGTTTTAGCTGAGCAAGTTCACCTGGGAAGTATAATTGGAGCTGTTCTCATTGTCTCCGGCCTTTACACTGTGGTATGGGGAAAAAGCAAAGACCGTCAAAACTCAATAGATACAGAGAAAGATGAAGGGCATGAATTGCCAATAAAGGACGGCACAAGATCAGGATTAGACGTTTTTGAGAACATTGAGGTCATTCCTGCTCACAAGTTGAAGGGTCCTGGGGAGGTTGTCCCACCCCCAACAAGATCATGA 1167 0.4687 MGDQDVSGSFSKTLRKVKPYLAMISLQFGYSGMYIITMVSFKHGMSHWVLSVYRHVVAFLLIAPFAFVLERKIRPKMTLPIFLRIVALGFLEPVLDQNLYNMGMKNTSTTFAAASVNVLPAITFVMALIFRLEKVNFKKFHSAAKVMGTVITVSGAMVMTLFKGPAFEIIKGRAGSHHNGASSEPSEQHWVLGTLMLIASCGGWAGFFILQSFTLKKYPAELSLTAWICLLGIFEGSIASLIMERGISVWVIGWDSRLLACVYSGVVCSGMAYYVQGVVTRERGPVFVTSFSPLCMIITAALGSLVLAEQVHLGSIIGAVLIVSGLYTVVWGKSKDRQNSIDTEKDEGHELPIKDGTRSGLDVFENIEVIPAHKLKGPGEVVPPPTRS 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1151 388 MobiDBLite consensus disorder prediction 338 357 - -
Glsi08g1151 388 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 162 - -
Glsi08g1151 388 Pfam EamA-like transporter family 192 330 IPR000620 GO:0016020
Glsi08g1151 388 Pfam EamA-like transporter family 31 150 IPR000620 GO:0016020
Glsi08g1151 388 MobiDBLite consensus disorder prediction 338 356 - -
Glsi08g1151 388 SUPERFAMILY Multidrug resistance efflux transporter EmrE 250 335 - -
Glsi08g1151 388 PANTHER WAT1-RELATED PROTEIN 18 337 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1151 Glsi-ChrGlsi08 8414638 8417475 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1151 14 355 Nodulin-like Gene Family AT4G08300 67.536 1.02e-168 474