Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1131 ATGGTCGTCGAGAAAAGCGCTAGGAATCGTCTAATCATTCTAAGGGATGGACGGCCATGTGCGGCAGAAGAGCTACCATGGCCGATACCTGATGGCGAGGACGCATGGTTTCTCTTGGATTCAAGAGTGGAATCGATTTCCAGGTTAGCCCAATGGAAAATTGAGAACTTTGGACCTTGCTCCTACAAAAAATCTGACCCTTTCAAGGTCGGAATCTGGAACTGGTACTTATCTATAGAAAGGAATAGGTACCTCTACATACGTCTATTTCCAGAGCCTTCACGGATTTCCAAGGAACAGCCACCAATTGCTCGATTTATTCTCCGAGTATCCAATAGCGGCTCATCCCGCAAATTCTATATTTCTCCTGTTCATGAAAGACTGCTTAGGACATGCGATGACTTTGTCTGGCCTCTTGATACTACATTCATAGGCCGTTTCATTATTGATGTTGAATTTCTTGACCTGAAGATCTTTCCTCTTAATGGTGGAGAAGCCAGTTCTATATGGCCATATGATGGAAAATTGCAACCCATTGCAGCTCAAAGCGCTCTGCAATGCCTCTCTTGCATGCTTAATGAAGGTATACATGCTGATCTCACCATTAACACTGCAGATGGTACATTGAAAGCTCACAAGGCAGTTTTGTCTGCAAGTTCTCCTGTGTTCCAAAGCATGTTTCATCACAATCTGAAGGAAGAAGAGTCACCAACTATCCACATAGAAGACATGTCACTAGAATCTTGCATGGCCCTTCTGAGTTACATGTATGGCACAATAAAACAAGAAGTCTTCTGGAAGCACAGGCTTGAGTTGCTGAGAGCAGCCAATAATTATGACATTGGTGGTCTCAAAGATGCCTGCGAGGAACGCCTGCTGGAAGATCTTAACTCAGAAAATGTTCTTGAGAGGCTAAACGAAGCTTGGCTTTATCAGTTGCACAAGTTAAAGAAAGGATGCTTCACATTCTTATTTGATTTTGGTAAGATATATGATGTTAGAGATGAAATAAATAACTTTTTCCGGCTTGCAGATGGGGAGCTGATGCTGGAGATGTTTCAGGAGTTGCTGAACATTTGGAAACCAATATAG 1092 0.4277 MVVEKSARNRLIILRDGRPCAAEELPWPIPDGEDAWFLLDSRVESISRLAQWKIENFGPCSYKKSDPFKVGIWNWYLSIERNRYLYIRLFPEPSRISKEQPPIARFILRVSNSGSSRKFYISPVHERLLRTCDDFVWPLDTTFIGRFIIDVEFLDLKIFPLNGGEASSIWPYDGKLQPIAAQSALQCLSCMLNEGIHADLTINTADGTLKAHKAVLSASSPVFQSMFHHNLKEEESPTIHIEDMSLESCMALLSYMYGTIKQEVFWKHRLELLRAANNYDIGGLKDACEERLLEDLNSENVLERLNEAWLYQLHKLKKGCFTFLFDFGKIYDVRDEINNFFRLADGELMLEMFQELLNIWKPI 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1131 363 SUPERFAMILY POZ domain 181 294 IPR011333 -
Glsi08g1131 363 ProSiteProfiles BTB domain profile. 198 257 IPR000210 GO:0005515
Glsi08g1131 363 Pfam BTB/POZ domain 192 294 IPR000210 GO:0005515
Glsi08g1131 363 PANTHER OS08G0495500 PROTEIN-RELATED 40 362 IPR044714 -
Glsi08g1131 363 Gene3D Potassium Channel Kv1.1; Chain A 175 325 IPR011333 -
Glsi08g1131 363 SMART BTB_4 198 296 IPR000210 GO:0005515
Glsi08g1131 363 CDD BTB_POZ_ZBTB_KLHL-like 197 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1131 Glsi-ChrGlsi08 8311143 8314381 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Glsi08g1131 BTB 1.2e-22 CL0033