Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1122 ATGACAGACTACTGCATGCCGGGGATGAGTGGCTATGATTTACTTAAACGACTCAAGCTGCAGGGATCTTCTTGGAAAGATGTACCAGTCGTCATTATGTCATCAGAAAATGTACCTTCCAGAATCAGCATGTGCTTGGAAGGAGGGGCGGAGGAGTTTCTATTGAAGCCTCTTCAGTTATCAGATTTGAAGAAGCTTCAGCCGTACCTTCTGAAATCCCTGAACAACTCATGTGAAGAAGAATTTGCCAACAGTAATAGTATTAGCAAAAGGAAGGCCATGTCACCAGAAGCTCCGGACAGATCAAGACCCAAAATGAAAGAGTTGGCGGTGGTGTAA 339 0.4454 MTDYCMPGMSGYDLLKRLKLQGSSWKDVPVVIMSSENVPSRISMCLEGGAEEFLLKPLQLSDLKKLQPYLLKSLNNSCEEEFANSNSISKRKAMSPEAPDRSRPKMKELAVV 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1122 112 PANTHER TWO-COMPONENT RESPONSE REGULATOR 1 85 IPR045279 GO:0009736
Glsi08g1122 112 MobiDBLite consensus disorder prediction 94 112 - -
Glsi08g1122 112 MobiDBLite consensus disorder prediction 84 112 - -
Glsi08g1122 112 SUPERFAMILY CheY-like 2 71 IPR011006 -
Glsi08g1122 112 Gene3D - 1 111 - -
Glsi08g1122 112 Pfam Response regulator receiver domain 2 65 IPR001789 GO:0000160
Glsi08g1122 112 ProSiteProfiles Response regulatory domain profile. 1 71 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1122 Glsi-ChrGlsi08 8274092 8274862 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1122 1 88 Response Regulator Gene Family AT3G57040 59.551 2.14e-34 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Glsi08g1122 Response_reg 4.8e-12 CL0304