Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1120 ATGGCAGAGCGCGTGTCACTCACACATTGTCTGCCGTTACCAACTCAATCGTCTACAACCAAAATGGCTGCTCTAGGTGGTGGCGCCTCGGTCTCTTCTCGCACCATCATCCCCTCTGTTACCAGAACCTCCGTCTCGCTTGCATTTTCCTCGTCGTCCTCTTCTTTTTCTTTCTATTCCAATTCCCTGCCCTCGCTCAAATGCCTAAGATCCTCTCCTCGCATTTTTGACTTATTTCTCAATCAGCGAAGAAAAGAGGTTCGTGTATCAAGTAGAGGATATAGCACAGTGTCTGCGCCGAAGTCCTTCGCGTCTGATCCTGATCAACTGAGGAGTGCAAGAGAAGATATCAAGGAGTTACTCAGGACTAAGTTCTGCCATCCTATTCTGATCCGCTTGGCATGGCATGATGCTGGTACTTATAATAAAAATATTGAGGAGTGGCCACAGAGAGGTGGAGCTAATGGTAGCTTAAAATTTGAAGTTGAGCTGAAACATGCAGCCAACGCTGGGCTTGTTAATGTATTGAAGCTTCTTCAGCCAATTAAAGACAAGTACTCTGGTGTGACATATGCAGACTTATTTCAGTTGGCTGGTGCTACTGCAGTGGAGGAGGCCGGAGGGCCAAAAATCCCTATGAAGTATGGAAGAGTGGATGTCTCAGGACCCGACCAATGTCCTGAAGAAGGGAGACTTCCTGATGCTGGCCCCCCTTCACCTGCTGATCATTTACGGAAAGTTTTCTACAGAATGGGTTTGAACGACAAGGAAATAGTTTCATTATCTGGTGCACACACACTAGGGCGGTCTAGACCAGAACGCAGTGGCTGGGGCAAGCCTGAGACCAAGTATACGAAAGATGGACCGGGAGCACCTGGGGGGCAGTCCTGGACAGTGCAATGGTTGAAGTTTGATAACTCTTACTTCAAGGACATCAAAGAAAGAAAGGATGAAGATTTATTGGTCTTGCCAACTGATGCTGTTCTTTTTGAAGATCCACCATTCAAGGTATATGCTGAGAAATATGCTGAAGATCAGGAAGCATTCTTTAAAGATTACGCTGAAGCCCATGCCAAACTTAGCAACCTTGGAGCCAAATTTGATCCTCCGGAGGGTATTGTGATAGGCGATGGTTCTCCAAAAGCTGAGCCGGAGAAGTTTGTAGCAGCCAAATATTCGTCTGGAAAGAGAGAGTTGTCAGAGTCTATGAAGCAGAAGATTCGGGCCGAGTATGAGGCAGTTGGTGGAAGCCCAGATAAGCCTCTACAGTCTAACTACTTTCTAAATATCATGATTGTCATTGCTGTTTTGGCACTTTTGACATCACTGCTAGGAAACTAG 1341 0.4638 MAERVSLTHCLPLPTQSSTTKMAALGGGASVSSRTIIPSVTRTSVSLAFSSSSSSFSFYSNSLPSLKCLRSSPRIFDLFLNQRRKEVRVSSRGYSTVSAPKSFASDPDQLRSAREDIKELLRTKFCHPILIRLAWHDAGTYNKNIEEWPQRGGANGSLKFEVELKHAANAGLVNVLKLLQPIKDKYSGVTYADLFQLAGATAVEEAGGPKIPMKYGRVDVSGPDQCPEEGRLPDAGPPSPADHLRKVFYRMGLNDKEIVSLSGAHTLGRSRPERSGWGKPETKYTKDGPGAPGGQSWTVQWLKFDNSYFKDIKERKDEDLLVLPTDAVLFEDPPFKVYAEKYAEDQEAFFKDYAEAHAKLSNLGAKFDPPEGIVIGDGSPKAEPEKFVAAKYSSGKRELSESMKQKIRAEYEAVGGSPDKPLQSNYFLNIMIVIAVLALLTSLLGN 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1120 446 MobiDBLite consensus disorder prediction 263 292 - -
Glsi08g1120 446 PRINTS Plant ascorbate peroxidase signature 188 206 IPR002207 GO:0004601|GO:0006979|GO:0020037
Glsi08g1120 446 PRINTS Plant ascorbate peroxidase signature 127 142 IPR002207 GO:0004601|GO:0006979|GO:0020037
Glsi08g1120 446 PRINTS Plant ascorbate peroxidase signature 326 350 IPR002207 GO:0004601|GO:0006979|GO:0020037
Glsi08g1120 446 PRINTS Plant ascorbate peroxidase signature 106 126 IPR002207 GO:0004601|GO:0006979|GO:0020037
Glsi08g1120 446 PRINTS Plant ascorbate peroxidase signature 207 219 IPR002207 GO:0004601|GO:0006979|GO:0020037
Glsi08g1120 446 FunFam L-ascorbate peroxidase S chloroplastic/mitochondrial 113 237 - -
Glsi08g1120 446 Gene3D - 113 366 - -
Glsi08g1120 446 Pfam Peroxidase 114 345 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi08g1120 446 ProSiteProfiles Plant heme peroxidase family profile. 189 377 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi08g1120 446 CDD ascorbate_peroxidase 98 368 - -
Glsi08g1120 446 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 93 368 IPR044831 GO:0004601|GO:0034599
Glsi08g1120 446 ProSitePatterns Peroxidases proximal heme-ligand signature. 257 267 IPR019793 -
Glsi08g1120 446 Gene3D Peroxidase, domain 2 235 358 - -
Glsi08g1120 446 SUPERFAMILY Heme-dependent peroxidases 107 366 IPR010255 GO:0004601|GO:0006979|GO:0020037
Glsi08g1120 446 FunFam L-ascorbate peroxidase T, chloroplastic 235 358 - -
Glsi08g1120 446 PRINTS Haem peroxidase superfamily signature 189 206 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi08g1120 446 PRINTS Haem peroxidase superfamily signature 257 272 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi08g1120 446 PRINTS Haem peroxidase superfamily signature 207 219 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi08g1120 446 PRINTS Haem peroxidase superfamily signature 297 312 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi08g1120 446 PRINTS Haem peroxidase superfamily signature 127 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1120 Glsi-ChrGlsi08 8260907 8266945 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1120 113 363 Peroxidase AT5G66390 29.010 2.25e-18 84.3