Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1119 ATGGCAGCTACGATCAGCAAGAAAGTGTTCGATTCGGAAGAGGCGTCAGCGATGGTGAAGGAGCTGGGAGTTACGTTTGCTTCTGGTAAGACTCGAAGCTATGGGTGGAGAGCTTCCCAGTTAGAGGCTATCATAAAGCTAACGGAAGAGAACCAGCAAGAGATTGTTCAGGCTCTTCATTCTGACCTCTCCAAGCCCGAAACTGAATCCTTCGTCCATGAGCAACTCTCCTTCTTGTTCTGTCATTCTGGTTGTTTGTGTTTGTCGCTGATAATGTCGACTAAGGAATCGAAGAAGGTATTCGATACGGAAACGGGTTCGTTGCTCGTGGAAGAGCTGAGGAGAACCTTCGCTTCTGGTAGGACGCGAAGTTATGAGTGGAGAGTTTCGCAGTTGAAAGCCCTTTTGAAGTTGGCCGATGATCGTGAGCAAGAGATCGTTGAAGCTCTACGCTCCGACCTCTCCAAGCCTCCCCTTGAAACATTCGTCTACGAGATTGGTATGTTGAAAAATTCATGTAAACTCGCACTCAAAGAACTGAAACGTTGGATGAAGCCAGAAAAGGTCAAAACTTCAATCACAACTTTTCCTTCTTCAGCTGAAATAGTATCTGAACCGCTGGGAGTTGTGTTAGTCATCTCTGCATGGAACTATCCATTCTTGTTATCACTTGATCCAGTCGTCGGAGCTATTGCAGCTGGTAACACTGTGGTTCTTAAACCATCAGAAATTTCTCCAGCCACATCTTCACTGCTCGCCAATTTGTTAGCGGAGTACATGGATAACTCTTCTATACGGGTTGTTGAGGGGGCGGTTGATGAAACATCTGCACTACTGCAGCAAAAGTGGGACAAAATTTTCTATACAGGTAATGGAAAAGTGGGACGCATAGTGATGGCTGCTGCTGCAAAACACCTTACACCAGTTGTTCTGGAGCTGGGAGGAAAATCTCCGGTTGTTGTTGATTCAAATATCAATTTACAAGTTGCAACTAGACGGATAATCGCAGGCAAGTGGGGATGTAACAATGGACAAGCTTGCATTTCTCCAGATTATATAATAACAACAAAGGACTATGCTCCCAAGTTGATGGATGCCCTAAAGACTGAATTGGAGAAATTTTATGGGAAGAACCCCTTAGCATCTGAAGATTTGTCCTGTATTGTGAATTCCAACCACTTTGCTCGCTTGAAAAAGCTCTTGGATGATGATAAGGTCTCTGGTAAGATTGTTTATGGAGGTGAAAAGGATGAAAGCAAATTGAGGATTGCTCCCACTCTTTTATTGGACGTTCCACGAGATTCTCTAATAATGAGGGAGGAGATATTTGGTCCTTTACTTCCCATTCTCACGGTCGATAAATTGGAAGAAAGCTTCAATGTGATTAATTCGGGAACAAAACCCCTCGCTGCATATTTATTTACCAACAACAAGAAGCTCAAGGAGCAGTTTGTGATGACTGTATCTGCAGGGGGTTTGGTTGTCAATGACACTACCTTACATCTCGCTACTCATACTTTGCCATTCGGAGGAGTTGGGGAGAGTGGAATGGGTGCATACCATGGGAAATTCTCCTTTGATGCATTTAGCCACAAAAAAGCAGTTTTGTATCGGGGTTTCATTGGAGATGCACCAGTGAGGTACCCACCATACACAAATACGAAGCTAAGATTGCTGAAAGCTTTGATCGCTGGTGGTGTACTTGGTATAATCCGCGCCCTTTTTGGATGGTCTTAG 1737 0.4427 MAATISKKVFDSEEASAMVKELGVTFASGKTRSYGWRASQLEAIIKLTEENQQEIVQALHSDLSKPETESFVHEQLSFLFCHSGCLCLSLIMSTKESKKVFDTETGSLLVEELRRTFASGRTRSYEWRVSQLKALLKLADDREQEIVEALRSDLSKPPLETFVYEIGMLKNSCKLALKELKRWMKPEKVKTSITTFPSSAEIVSEPLGVVLVISAWNYPFLLSLDPVVGAIAAGNTVVLKPSEISPATSSLLANLLAEYMDNSSIRVVEGAVDETSALLQQKWDKIFYTGNGKVGRIVMAAAAKHLTPVVLELGGKSPVVVDSNINLQVATRRIIAGKWGCNNGQACISPDYIITTKDYAPKLMDALKTELEKFYGKNPLASEDLSCIVNSNHFARLKKLLDDDKVSGKIVYGGEKDESKLRIAPTLLLDVPRDSLIMREEIFGPLLPILTVDKLEESFNVINSGTKPLAAYLFTNNKKLKEQFVMTVSAGGLVVNDTTLHLATHTLPFGGVGESGMGAYHGKFSFDAFSHKKAVLYRGFIGDAPVRYPPYTNTKLRLLKALIAGGVLGIIRALFGWS 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1119 578 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 315 515 IPR016163 GO:0016620
Glsi08g1119 578 SUPERFAMILY ALDH-like 109 551 IPR016161 GO:0016491
Glsi08g1119 578 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 114 533 IPR016162 GO:0016491
Glsi08g1119 578 Pfam Aldehyde dehydrogenase family 114 535 IPR015590 GO:0016491
Glsi08g1119 578 PANTHER ALDEHYDE DEHYDROGENASE 109 565 IPR012394 GO:0006081
Glsi08g1119 578 CDD ALDH_F3FHI 107 537 - -
Glsi08g1119 578 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 311 318 IPR029510 GO:0016491
Glsi08g1119 578 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 3 82 IPR016162 GO:0016491
Glsi08g1119 578 FunFam Aldehyde dehydrogenase 114 318 - -
Glsi08g1119 578 FunFam Aldehyde dehydrogenase 315 515 - -
Glsi08g1119 578 SUPERFAMILY ALDH-like 13 78 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1119 Glsi-ChrGlsi08 8244935 8259855 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1119 166 576 Aldehyde Dehydrogenase Gene Family AT1G44170 75.426 0.0 662