Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1104 ATGTTGAGCTCAAATCTCCATCGGTCGTCCTCTTCGCCATCTGCGGAGAAGAGGTCGTCAGTTTCTGATAATTTTAGCGAGAAGGTTCCTGCTGTGAAGACCCATTTGACAATGAAGCGTCCTGCTCTCGGGGACGTAACCAATCAAAGATATGCCTCTATCATCGGTATAAGGACCTCCATTGCTGCTCCATCCAAGCCTATGGTTCCATGCGCCTCTAAAACTGCCAAGACAAATAAGGAACCTATTACCAGCTCTCAGAAAGAAGATACATTTAGGGACTATTTGCAATCCTCAATGACTGTGAAATCAAGTGACTTGTTTCTTCCAAAAGATGCATCTTCAACGAGTACTAGTCAACCAAATGCTGGGGCTGCGGTCTTCCATGATTCAAGTATTGTTGGTACTGTTGGTCCTGCTTTTACTAGTTTGGTCTGTCCCTCCAGAATGATGGACATTTCACCAATTAAGTCCTTTGGTGGCTCAGTTTCACTGGAGGAGAGCATTTCCTCCCGTGATTCTTTGAGGAGTCCAGAATTTGAATATATTGACAATGAGGATACTGTATTAGTTAAATCAATTGAGACAAAGACAAGTAGCATTCTCAATATTTCAGACTATTCTAAAGTTGCAGGGAGAATATGTGATAGTGAAGTTGTGGATATTGACAAAAGTTTCAAAGACCCACAAGTTTGTGCATCCATGGCACATGAAATCTATGAATATTTATGTGTATCTGAGGAAAGTAAAAGGCCATCTATGGACTTCATGGAGAAAATACAGAAAGATGTCAATTCTAGCATGCGGGCAATACTTATTGATTGGCTTGTGGAGGTTGCTGAGGAGTACCGGCTTCTACCTGATACACTATATTTGGCTGTGAATTACCTAGATCGTTATCTTTCTGGAATTGCAATGAATAGGAAGCGATTGCAATTGCTTGGTATGAAATCACTGCAGGTGTTGCAGATGGAATCTGATGTGCTGAGTTTCTTGAAGTTTGAAATGACAGCTCCAACAGCCAGATGTTTTTTGAGGCGCTTCATTATTGTTGCCCAACAAACTTGTGAGGTTCCACGGTTGCAGTTGGAGTATTTGGCAGACTATCTTGCAGAGTTATCTCTTCTAGAGTATAGCATGCTTCAGTACACGCCATCATTAATAGCTGCGTCAGCCATTTTCTTGGCTCAATTCATACTACTCCCTCGGAAGAAACCTTGGAATTCAACACTAAGGAATTACACATGTTACCAAGCCTCAGAACTGCGTGATTGTGTCAAGGCATTGCATTGGTTGTGCTGTCATGGCAGTTATAATTTACCTGCCATTAGGGAGAAATACAGTCAGCATAAGCATGTTGAGCTCCTTTCTGTAGTTCTGGATCTTATCAGCAAAGCAATGGGGTGCTCTCCTTACTCATCTTGCTATGTGGAATATTGCGTCTGCTAG 1449 0.4203 MLSSNLHRSSSSPSAEKRSSVSDNFSEKVPAVKTHLTMKRPALGDVTNQRYASIIGIRTSIAAPSKPMVPCASKTAKTNKEPITSSQKEDTFRDYLQSSMTVKSSDLFLPKDASSTSTSQPNAGAAVFHDSSIVGTVGPAFTSLVCPSRMMDISPIKSFGGSVSLEESISSRDSLRSPEFEYIDNEDTVLVKSIETKTSSILNISDYSKVAGRICDSEVVDIDKSFKDPQVCASMAHEIYEYLCVSEESKRPSMDFMEKIQKDVNSSMRAILIDWLVEVAEEYRLLPDTLYLAVNYLDRYLSGIAMNRKRLQLLGMKSLQVLQMESDVLSFLKFEMTAPTARCFLRRFIIVAQQTCEVPRLQLEYLADYLAELSLLEYSMLQYTPSLIAASAIFLAQFILLPRKKPWNSTLRNYTCYQASELRDCVKALHWLCCHGSYNLPAIREKYSQHKHVELLSVVLDLISKAMGCSPYSSCYVEYCVC 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1104 482 Gene3D - 326 459 - -
Glsi08g1104 482 SUPERFAMILY Cyclin-like 227 336 IPR036915 -
Glsi08g1104 482 MobiDBLite consensus disorder prediction 66 88 - -
Glsi08g1104 482 FunFam G2/mitotic-specific cyclin 252 321 - -
Glsi08g1104 482 CDD CYCLIN_AtCycA-like_rpt2 339 452 - -
Glsi08g1104 482 Gene3D - 252 319 - -
Glsi08g1104 482 Gene3D - 238 251 - -
Glsi08g1104 482 MobiDBLite consensus disorder prediction 1 26 - -
Glsi08g1104 482 PANTHER CYCLINS 184 319 IPR039361 -
Glsi08g1104 482 SUPERFAMILY Cyclin-like 339 454 IPR036915 -
Glsi08g1104 482 ProSitePatterns Cyclins signature. 269 300 IPR006671 -
Glsi08g1104 482 Pfam Cyclin, N-terminal domain 238 319 IPR006671 -
Glsi08g1104 482 PIRSF Cyclin_A_B_D_E 163 319 IPR046965 GO:0016538|GO:0044772
Glsi08g1104 482 PIRSF Cyclin_A_B_D_E 317 465 IPR046965 GO:0016538|GO:0044772
Glsi08g1104 482 PIRSF Cyclin_A_B_D_E 3 132 IPR046965 GO:0016538|GO:0044772
Glsi08g1104 482 SMART Cyclin_C_2 339 459 IPR004367 -
Glsi08g1104 482 SMART cyclin_7 347 431 IPR013763 -
Glsi08g1104 482 SMART cyclin_7 274 346 IPR013763 -
Glsi08g1104 482 FunFam Cyclin A1 327 456 - -
Glsi08g1104 482 Pfam Cyclin, C-terminal domain 339 453 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1104 Glsi-ChrGlsi08 8130276 8134499 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1104 154 452 Core Cell Cycle Gene Families AT1G44110 52.493 6.33e-116 347