Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1078 ATGCCCCCGCGCCGGTGCGCAGTGGCGAGGCACGGATGGGATTCCGGTAGCGACATCGATTACGATTACGGAGTCAACAAAATGCGGTGTTTGTCATGCGACGAGGATTACGACCCCGATGACGCCGGCACCTGCAAGGAGTGCTACGAGGAAGCCAACGACACCGAGGAGGAGCTTAAGAGAGAGATTGATGACTTGAAGGTCAAAGTTGCTTTCCTCAAGCTTTTGTCTCCATTTGATCTCAATAATCGCTCAAATGGTCCCAGCTTCACTGACGTCGTCTTGGTTGCCTTCGATGATTGTTCTGCCGGACTCGCCGTGCCGGTTCCGGCTCACAAGGCTGTTCTGGTTAGTCGGTCACCAGTTTTCAAAGCAATGCTTGAGAATGATATGGAGGAAAGTCGGAGTGGCACCATCAAGATTAGTGATGTATCATATGATGTTCTCCGTGCCTTTGTTAACTATTTATACACTACAGAAGCATGCCTTGATGACCAAATGGCCTGTGACCTGTTAGTTTTAGCTGAAAAATATCAGGTTAAGCAGCTTAAGACATATTGTGAAAAGTTTTTGATGGTCAGACTGAATTGGGACAAAGCAGTCGCAAACTATGCCTTTGCACATCAATACAATGCCCAACAATTGCTAGATGCTGCCTTGACATTGATAATAGACAACATGGACAAGCTTACTAAACATACGGCGTATGTGGAGCTGGTGGAGAGTAATCCCCGTCTTGTGGTGGAAATCTACGAAGCTTATCTATCCAAACAGGTTAATACTGCGCAAAAGGGTTCTTCTTTGAAGAAATAA 813 0.4649 MPPRRCAVARHGWDSGSDIDYDYGVNKMRCLSCDEDYDPDDAGTCKECYEEANDTEEELKREIDDLKVKVAFLKLLSPFDLNNRSNGPSFTDVVLVAFDDCSAGLAVPVPAHKAVLVSRSPVFKAMLENDMEESRSGTIKISDVSYDVLRAFVNYLYTTEACLDDQMACDLLVLAEKYQVKQLKTYCEKFLMVRLNWDKAVANYAFAHQYNAQQLLDAALTLIIDNMDKLTKHTAYVELVESNPRLVVEIYEAYLSKQVNTAQKGSSLKK 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1078 270 ProSiteProfiles BTB domain profile. 91 165 IPR000210 GO:0005515
Glsi08g1078 270 Coils Coil 45 76 - -
Glsi08g1078 270 SMART BTB_4 91 195 IPR000210 GO:0005515
Glsi08g1078 270 Pfam BTB/POZ domain 84 191 IPR000210 GO:0005515
Glsi08g1078 270 SUPERFAMILY POZ domain 81 192 IPR011333 -
Glsi08g1078 270 CDD BTB_POZ_ZBTB_KLHL-like 90 178 - -
Glsi08g1078 270 CDD BACK 204 239 - -
Glsi08g1078 270 FunFam BTB/POZ domain-containing protein 197 270 - -
Glsi08g1078 270 Gene3D - 196 270 - -
Glsi08g1078 270 Gene3D Potassium Channel Kv1.1; Chain A 74 195 IPR011333 -
Glsi08g1078 270 PANTHER SPECKLE-TYPE POZ PROTEIN 58 264 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Glsi08g1078 BTB 4.5e-24 CL0033