Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1069 ATGGCATCGTCTTCGAATTCCCCATGTGCGGCTTGTAAGTTTCTGCGGAGAAAGTGCCAACCAGAGTGCGTGTTTGCACCCTACTTCCCACCAGATCAGCCCCAGAAATTTGCAAATGTTCACAAAGTGTTCGGAGCAAGTAACGTCACCAAGCTTCTGAACGAGTTACCCCCCCACCAGCGGGAAGATGCCGTCAATTCCCTCGCTTATGAGGCCGACATGCGCCTCCGCGACCCCGTTTATGGCTGCGTTGGAGTCATCTCTCTCCTCCAACACCAACTCCGCCAACTCCAAATGGACCTTACCTGCGCCAAATCCGAGCTCTCTAGGTACCAAACCTTGGGCCTCACTAGCCATGGCCTCTTTGCAGCCACCCATCAAACACAAAACATGGGCATCAATCTCATCGGCGGTGGGCGTGACCACCACTACCATCACCACCACCAGCCCATGATCAGGAGTTTGGATGCAGGAAATAACTATGACGCCACTCTCTTGTCTATGAACGTCTCTGCAAGCATAGGCCAACTCAATCAGTTTCAGCAGCCCAGAGCTGGCGGTGCCGACGACCGCCGAACCATCCATCCCTCTTAG 594 0.5421 MASSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELPPHQREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQMDLTCAKSELSRYQTLGLTSHGLFAATHQTQNMGINLIGGGRDHHYHHHHQPMIRSLDAGNNYDATLLSMNVSASIGQLNQFQQPRAGGADDRRTIHPS 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1069 197 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 5 145 - -
Glsi08g1069 197 ProSiteProfiles LOB domain profile. 7 108 IPR004883 -
Glsi08g1069 197 Coils Coil 87 114 - -
Glsi08g1069 197 Pfam Lateral organ boundaries (LOB) domain 8 105 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1069 Glsi-ChrGlsi08 7843549 7844142 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1069 2 197 AS2 family AT1G65620 70.952 2.85e-88 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Glsi08g1069 LOB 1e-43 No_clan