Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1056 ATGGCTCTTGGGAAGAATTCCCGAGTTGAAGGGAGGAAGTCATCAAACTACTACTCGACAGTCTCTGTAGTTGTGTTTGTTGCATTTTGTTTACTTGGTATATGGATACTAATGTCATCCATGGTTCCAATTCAAAATTCAGACTTCCAGGAATCTGAGACCATTAATGAGGTGAAAAATATAGTAGGTCAAAATGGCTCAATGCGATTTGGAGATGGTTCAGGTGATATACAGGATAAGCCAACAAAGGTAGATGGCCAGACCAGTAAATCTCAGAGTGAAAACCATTTAGAAAACCAGGAGGACCAAAAAGCAATTGTAGTGGAGAGTTCTGTTGAGAAGAATGAATCAGTTAAGAGTTCTAAAAATACAATTAAGGAGAATTATCAAGAGACACGTGTGAAGCCAAACTCTAAGGAGAAAGACATGGACAGAAACTTAAATTCAGAATCTGTAGAAACTGAAATACTAGGTGGCCAAATTAATGATGAAAAGCAATTCAACAAAAACATAAGTGACAATAAATTAGGGGCAGAAAAGAATACAGGTGATGTCAAACAGCGAGATGAGATGACTGATGAGACTGAGGAGGAGAAAATAAAAAAAAATTTGCATTCAAAGACAGAACAAAGTACTGGAGAGAGTACTATGGAAAGTCGTGAAAACATTCAAGCTTCAAAAGAATCTTTTACCGCCAGTGCTCAGTCTGAAACTTTGAACAAAGCTACCACTGAAAATGGAACTTGGTCAACTCAAATTGTAGAGTCCCAACATGAGAAGGTATTACAGAAGTCTTCGATTTCTAGTGACAGCAGCAGATATGACTGGAAACTTTGTAATGCAACTGCAGGATCAGAGTACATTCCTTGCCTTGACAATTGGAAAGCAATTAGAAAACTTCGAAGTATACGGCACTATGAACATCGGGAGAGGCACTGTCCTGATGAGGCTCCCACTTGTCTTGTTCCTCTACCAGAGGGCTATAGAATCCCAATCAAGTGGCCCAAAAGCAGGGAAATGATATGGTACAACAATGCACCACACACAAAACTTGTGGAATTTAAAGGTCATCAAAACTGGGTCAAAGTTGCTGGCGAATACCTTAATTTTCCTGGAGGTGGAACTCAGTTTAAACATGGTGCTCTTCATTACATAGAATTCATTCAGAAATCGCTTCCTAATATTGCATGGGGGAAAAGAAGTCGTGTGATATTGGATGTTGGGTGTGGGGTAGCCAGTTTTGGAGGTTACCTGTTTGAGAAAGATGTTCTTGCCATGTCATTTGCTCCTAAAGATGTGCACGAGGCCCAAGTTCAATTTGCACTTGAACGAGGAATTCCTGCCATATTAAGCGTTATGGGCACAAAAAGATTGCCCTTCCCTGGTTCTGTCTTTGATCTTGTCCACTGTGCACGCTGTAGAGTCCCTTGGCACATAGAAGGTGGTAAGCTACTTCTGGAGCTTAATCGTGTCTTGCGACCTGGAGGTCACTTTGTATGGTCTGCTACTCCAGTGTATCAAAAGAACCTAGAAGATGCTGGGATTTGGAAAGCTATGGGTGAACTTACGAAGTCAATGTGCTGGGATTTAGTGGTGATTGGAAAGGACAAATTGAATGGAGTGGCAGCAGCAATATATAGAAAACCAACTTCCAATGAATGCTATAACAGAAGACCCAAAAATGAGCCTCCATTGTGCAATGAGTCCGATGATGCAAATGCTGCCTGGAATATATCACTACAGACCTGTATGCACAAAGTGCCTGTAGGTGTATCAGAGCGTGGATCACTCTGGCCTGTACAATGGCCAATGAGATTGGAGAAACCACCTTACTGGTTAAACTCTCAGGCAGGTGTTTATGGAAGAGCCGCTCCCATAGATTTCACTGCTGACTCTAAGCATTGGAAAAACGTTCTTTCCCACTCATATATGGATGGAATGGGTATCAACTGGTCTTCGGTTAGAAATGTCATGGACATGAGAGCTGTTTATGGAGGGTTTGCTGCATCTCTGAAAAACTTCAAAGTGTGGGTAATGAATGTAGTTCCGATTGACTCTCCAGACACACTGCCAATAATCTATGAGCGTGGCTTATTTGGTATTTATCACGATTGGTGTGAATCATTCAATACGTACCCTCGATCTTATGATCTTCTCCACGCTGATTATCTATTCTCAAAAACTAAGGAAAGGTGCAATATAGTTGCAGTAATTGCAGAAGTTGATAGGATCTTGAGACCCGACGGTTATTTGATCACAAGGGACAGTGTTGAAACTACAGGTGAGATAGAGAGCATAGCTGAGTCTCTACACTGGGATATTCGGTTTACCTATTCAAAAGACAGTGAGGGATTACTCTGTATTCAGAAGACATTCTGGCGTCCTACAAAGACAGAAACCATTGTGTCAGCCATTGCTTGA 2421 0.4131 MALGKNSRVEGRKSSNYYSTVSVVVFVAFCLLGIWILMSSMVPIQNSDFQESETINEVKNIVGQNGSMRFGDGSGDIQDKPTKVDGQTSKSQSENHLENQEDQKAIVVESSVEKNESVKSSKNTIKENYQETRVKPNSKEKDMDRNLNSESVETEILGGQINDEKQFNKNISDNKLGAEKNTGDVKQRDEMTDETEEEKIKKNLHSKTEQSTGESTMESRENIQASKESFTASAQSETLNKATTENGTWSTQIVESQHEKVLQKSSISSDSSRYDWKLCNATAGSEYIPCLDNWKAIRKLRSIRHYEHRERHCPDEAPTCLVPLPEGYRIPIKWPKSREMIWYNNAPHTKLVEFKGHQNWVKVAGEYLNFPGGGTQFKHGALHYIEFIQKSLPNIAWGKRSRVILDVGCGVASFGGYLFEKDVLAMSFAPKDVHEAQVQFALERGIPAILSVMGTKRLPFPGSVFDLVHCARCRVPWHIEGGKLLLELNRVLRPGGHFVWSATPVYQKNLEDAGIWKAMGELTKSMCWDLVVIGKDKLNGVAAAIYRKPTSNECYNRRPKNEPPLCNESDDANAAWNISLQTCMHKVPVGVSERGSLWPVQWPMRLEKPPYWLNSQAGVYGRAAPIDFTADSKHWKNVLSHSYMDGMGINWSSVRNVMDMRAVYGGFAASLKNFKVWVMNVVPIDSPDTLPIIYERGLFGIYHDWCESFNTYPRSYDLLHADYLFSKTKERCNIVAVIAEVDRILRPDGYLITRDSVETTGEIESIAESLHWDIRFTYSKDSEGLLCIQKTFWRPTKTETIVSAIA 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1056 806 MobiDBLite consensus disorder prediction 165 246 - -
Glsi08g1056 806 CDD AdoMet_MTases 404 499 - -
Glsi08g1056 806 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 286 789 IPR004159 GO:0008168
Glsi08g1056 806 FunFam probable methyltransferase PMT23 376 560 - -
Glsi08g1056 806 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 310 563 IPR029063 -
Glsi08g1056 806 MobiDBLite consensus disorder prediction 66 147 - -
Glsi08g1056 806 MobiDBLite consensus disorder prediction 179 208 - -
Glsi08g1056 806 MobiDBLite consensus disorder prediction 95 147 - -
Glsi08g1056 806 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 21 794 IPR004159 GO:0008168
Glsi08g1056 806 MobiDBLite consensus disorder prediction 209 246 - -
Glsi08g1056 806 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 651 760 IPR029063 -
Glsi08g1056 806 Gene3D Vaccinia Virus protein VP39 358 531 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1056 Glsi-ChrGlsi08 7732678 7739208 Wgd