Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1052 ATGGCCAACAATGCAGCAGCCTGTGCAGAGAGGGCAACTAGTGACATGCTGATTGGTCCGGACTGGGCAATTAACATAGAGTTGTGTGATATCATTAATATGGACCCGAGGCAAGCAAAGGATGCATTAAAGATACTCAAGAAGCGCTTGGCCAGCAAAAATCCCAAAATACAACTTCTGGCACTTTTTGTACTGGAGACACTTAGCAAAAATTGTGGTGAAAGTGTATTTCAGCAGATCATTGAGCGGGATGTCTTACATGAAATGGTAAAGATAGTGAAGAAGAAGCCGGACTTAAATGTGAGGGAAAAGATACTAATTTTGATTGATATGTGGCAAGAAGCTTTTGGAGGCCCAAGTGGAAGGTATCCCCAGTACCATGCGGCATATAATGAACTAAAGTCTGCTGGAGTTGAATTTCCGCCACGGGAAGAGAATATGGCACCATTGTTCACTCCTCCCCAAACCCAACCAATTGTTCATCCTGCTACAGAATATGATGATGCTGCTATTCATGCTTCTCTTCAGTCAGATGCTTCTGGCCTTAGCTTGCCAGAGATTCAAACTGCTCAAGGACTAGCTGATGTATTGATGGAAATGCTTAGTGCCTTGGATCCAAAAAATCCCGAGGGTTTGAAGCAAGAAGTGATTGTTGACCTTGTTGATCAGTGCCGTTCTTACCAAAAGCGAGTCATGCTTCTTGTGAACGATACTGCGGATGAGCAGCTTTTAGGTCAGGGATTGGCTCTGAATGACAGCCTGCAGCGAGTACTTGCTCGACACGATGATATTGTTAAAGGAACTCCTATTTCAGGTGCAAGAGAAACAGAAACTTCAGTTCTGCCACTTGTGAATGTAAACCACGAGGATGATGAGTTAGAAGATGATTTTGATCAACTAGCCCCTAGATCATCAAGAGAGACACATGCACTGGGCCGAAAACCAGCCAATGACAAGGCAGAACCAGTGAGAGTAAATCCACTTCTTCCCCCGCCACCAGCATCAAGGAAGCCAGTTTTCTCTGACTCTGGCGTGATTGACTATCTCAGTGGTGATGCATACAAAGCAGGATACCCTGAAAACTCAGAACCAACACCATTTGCAGGTCCACTTCATTCTAGCCCTAATCCTACCTCATCAACAACTCCAACACTCTCTACCTCACCCCCACCTCATCTCACGAGTGCTTCACCAACTTTTAGCAGACAGCCTGTGTATGATGAACCATCTCCAATGAGCAAATCTTCGGAACAACTTCCTCCAGCTCCCTGGGAGACCCAGTCTCCAGTTGTCCTTCCACCCCCACCTTCAAGGTATAATCAGAGACAACAGTTTTTTGAGCAACATGGTGCATCTAATTCAAGTAGTGGGTCCAATTCTTCTTATGACGGCTTGGTGGGACAAACTCAGAATATGTCTTTGAATTCATCTACCCCAACCAAACAAGAGAAGCCAGAAGATGCCCTTTTCAAAGATCTAGTTGACTTTGCAAAATCCAAGACCTCTTCATCTTCAAATCCCAATAGGTCATTTTGA 1536 0.4473 MANNAAACAERATSDMLIGPDWAINIELCDIINMDPRQAKDALKILKKRLASKNPKIQLLALFVLETLSKNCGESVFQQIIERDVLHEMVKIVKKKPDLNVREKILILIDMWQEAFGGPSGRYPQYHAAYNELKSAGVEFPPREENMAPLFTPPQTQPIVHPATEYDDAAIHASLQSDASGLSLPEIQTAQGLADVLMEMLSALDPKNPEGLKQEVIVDLVDQCRSYQKRVMLLVNDTADEQLLGQGLALNDSLQRVLARHDDIVKGTPISGARETETSVLPLVNVNHEDDELEDDFDQLAPRSSRETHALGRKPANDKAEPVRVNPLLPPPPASRKPVFSDSGVIDYLSGDAYKAGYPENSEPTPFAGPLHSSPNPTSSTTPTLSTSPPPHLTSASPTFSRQPVYDEPSPMSKSSEQLPPAPWETQSPVVLPPPPSRYNQRQQFFEQHGASNSSSGSNSSYDGLVGQTQNMSLNSSTPTKQEKPEDALFKDLVDFAKSKTSSSSNPNRSF 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1052 511 Gene3D - 175 271 IPR038425 -
Glsi08g1052 511 MobiDBLite consensus disorder prediction 356 511 - -
Glsi08g1052 511 SMART VHS_2 5 137 IPR002014 GO:0035091|GO:0043130
Glsi08g1052 511 SUPERFAMILY GAT-like domain 144 267 - -
Glsi08g1052 511 SUPERFAMILY ENTH/VHS domain 8 142 IPR008942 -
Glsi08g1052 511 CDD VHS 10 135 - -
Glsi08g1052 511 PIRSF TOM1 1 511 IPR014645 -
Glsi08g1052 511 Pfam VHS domain 9 136 IPR002014 GO:0035091|GO:0043130
Glsi08g1052 511 CDD GAT_GGA-like_plant 186 264 - -
Glsi08g1052 511 MobiDBLite consensus disorder prediction 437 483 - -
Glsi08g1052 511 MobiDBLite consensus disorder prediction 497 511 - -
Glsi08g1052 511 Pfam GAT domain 193 267 IPR004152 GO:0035091|GO:0043130
Glsi08g1052 511 ProSiteProfiles GAT domain profile. 178 266 IPR004152 GO:0035091|GO:0043130
Glsi08g1052 511 ProSiteProfiles VHS domain profile. 12 141 IPR002014 GO:0035091|GO:0043130
Glsi08g1052 511 MobiDBLite consensus disorder prediction 300 320 - -
Glsi08g1052 511 FunFam TOM1-like protein 2 4 151 - -
Glsi08g1052 511 PANTHER TOM1-LIKE PROTEIN 1 507 IPR044836 GO:0035091|GO:0043130|GO:0043328
Glsi08g1052 511 MobiDBLite consensus disorder prediction 367 423 - -
Glsi08g1052 511 Gene3D - 2 158 IPR008942 -
Glsi08g1052 511 MobiDBLite consensus disorder prediction 300 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1052 Glsi-ChrGlsi08 7715031 7720757 Dispersed/Wgd