Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1045 ATGGAGAGCTCTCCTTCGCCGTCTTATGTCGTCATTGCATATGATGCCACAAAAGTTGGCAGTGAGCACGAGATCAAGCTCATTATTGATCACGTCCGAAGTACTGGTGGCTTTCTGTTTGCAGGTGACAGATTGCTAGTGCTTGGCGTCTTGCATAAGGTGCTTCACCCCATGGGGTACCAGACATTAGCATGCCCTGAGTCTTTTGCTGGCACGAACTTCCGTACAATGGAGGATGAAGTTAGCAAGAAAGTTAATACATATGCAAGTATGCTTTTGGCTAGTTATCAAGATTGCGAAAAGGAAGGGGTTAGCATCGAAGTCAAAGTCACTGCAGGTTTTCCAATTAGACAGGTTATTTTACAAGAGGTTGCAAACTATCATGCAGCTTGGGTTATACTTGATAGGCACCTTCGTCGGGACTTGAAATTTTACCTTAACAAGATACCATGTAAGGTTGCATTGGTTAAAGATGACTTGTCTGTGGATATCTGGAGATCTCATCATACCCTTGAAACAGATGTCACCGAAAACAAGCTTGTCTATTCTTTGTCCAAATTTGTTTCACTATCAGGTTGTCATAGTATTGAAGACATTGGCCATTCTATTGTCTCTTGCAAAAGCTATCCCTCATCCGTGGTTTCATCTGATAGTTCTGATATGTTTAGGAGCAGCACAAAGCACTCATATGCGTCACGTGAGCAATATTCCTCGTCAGATTTTGGATCATCTTCTAAGTCAGGTATAAGCGTCAAAGGAGAATATAAACATTCCATTACTTCTCAGATTGTCCAAACGCAAAACAAATATGGCTTTATACCAAAATCTTCAGATGCACCTATCCTTTGTACTGGTTGTGGGACAAGGACTGAATTGTATACTAAGGACTCAATGGGGTTCATCTATTCTGACATACTGCTTGCGACAAATGATTTTTCAAAGGATAACTTAATAGGTGAAGGTGGTTATGGTCATGTATACAAGGGTATTCTTAGAGATGGACAGCAAATTGCAGCAAAGGTGAGAAAAGAAGAAAGTACGCAGGGGTTTTCTGAATTCCATTCTGAGGTTTATGTCTTAAGTTTTGCTCGACACAAGAACATAGTGATGCTGTTGGGTTACTGTTGCAAAGAAAGGCAAAATATTTTGGTATATGAATATATTTGCAATAAGTCTCTTCACTGGCATTTATTCGATAAGGACGCTACAGTTCTTGAGTGGCACCAAAGATATGCTATTGCCATTGGAACTGCAAAGGGATTGCGTTTTCTCCATGAAGAATGTCGTGGAGGACCCATTATTCATCGAGACATGCGACCAAGCAATATACTTCTTACTCATGATTTTGTTCCCATGCTAGGTGACTTTGGCCTTGCCAAATGGAAGACTGGTGGTGATGATACCATGCAGACGAGGATAATGGGCACATTAGGAAATCTTAAACAATCTTTTCGTTTATGTAGATACCTTGCTCCGGAGTATGCTGAAGATGGCATTGTTTCTGTGCGGATAGATGTGTATGCATACGGGATAGTTCTGCTACAACTGCTATCAGGACGCAAGGTGGGCAAATCCAATAATCCAGAACAGCAATCTCTCCGACAATGGGCTGAGCCATTGATTGAGAATTTGGCTTTACATGAAGTCGTTGACGCTCGTCTTGGGGAGTCATATGACACATATGAACTATACCTTATGGCAAAAGCAGCATACTTCTGTGTGCAAAGAGAGCCTGAGATCCGACCATCAATGGGAGAGGTTGTGCGGCTTCTTGAAGGAGAAAATGACCACTTCCATTCCATGGGACATCAATTCATACCTAGTTATAATATGTGA 1836 0.4156 MESSPSPSYVVIAYDATKVGSEHEIKLIIDHVRSTGGFLFAGDRLLVLGVLHKVLHPMGYQTLACPESFAGTNFRTMEDEVSKKVNTYASMLLASYQDCEKEGVSIEVKVTAGFPIRQVILQEVANYHAAWVILDRHLRRDLKFYLNKIPCKVALVKDDLSVDIWRSHHTLETDVTENKLVYSLSKFVSLSGCHSIEDIGHSIVSCKSYPSSVVSSDSSDMFRSSTKHSYASREQYSSSDFGSSSKSGISVKGEYKHSITSQIVQTQNKYGFIPKSSDAPILCTGCGTRTELYTKDSMGFIYSDILLATNDFSKDNLIGEGGYGHVYKGILRDGQQIAAKVRKEESTQGFSEFHSEVYVLSFARHKNIVMLLGYCCKERQNILVYEYICNKSLHWHLFDKDATVLEWHQRYAIAIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAKWKTGGDDTMQTRIMGTLGNLKQSFRLCRYLAPEYAEDGIVSVRIDVYAYGIVLLQLLSGRKVGKSNNPEQQSLRQWAEPLIENLALHEVVDARLGESYDTYELYLMAKAAYFCVQREPEIRPSMGEVVRLLEGENDHFHSMGHQFIPSYNM 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1045 611 SUPERFAMILY Protein kinase-like (PK-like) 294 592 IPR011009 -
Glsi08g1045 611 ProSiteProfiles Protein kinase domain profile. 312 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi08g1045 611 Gene3D Transferase(Phosphotransferase) domain 1 389 604 - -
Glsi08g1045 611 ProSitePatterns Tyrosine protein kinases specific active-site signature. 433 445 IPR008266 GO:0004672|GO:0006468
Glsi08g1045 611 PANTHER OS01G0750732 PROTEIN 162 596 - -
Glsi08g1045 611 Pfam Protein kinase domain 313 535 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi08g1045 611 ProSitePatterns Protein kinases ATP-binding region signature. 318 340 IPR017441 GO:0005524
Glsi08g1045 611 Gene3D Phosphorylase Kinase; domain 1 284 387 - -
Glsi08g1045 611 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 284 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1045 Glsi-ChrGlsi08 7681533 7688094 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1045 300 592 Trihelix Transcription Factor Family AT5G38560 42.667 2.07e-73 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Glsi08g1045 Pkinase 7.3e-36 CL0016