Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1041 ATGGTAAAGGAAACAGAGTATTATGATATTCTTGGGGTTAGTCCCTCGGCTGCCGACGATGAAATTCGCAAAGCTTATTACCAGAAGGCATTGCAAGTTCATCCAGATAAAAACCCAAATGATCCTCAGGCTGCAGAAAAGTTCCAGGTTTTGGGTGAAGCTTATCAAGTATTAAGCGATCCAGTGCAAAGGAATGCATACAATCGAAACGGAAAGCACTCAGTGTCTAGAGAAACTATGCTTGACCCCATGGCTGTCTTTGCCCTGCTCTTTGGAAGCGAATTATTTGAGGACTACATTGGGCATCTAGCAGTAGCATCAATGGCTTCTTCTGGACTAGCTGATGAAAGCGAGGATCCGGATAAACTACATGAAAAATTGAAGGCGAGTATGTTTGGTAATTCAGTTGTCCAAAAAGAAAGGGAAGAAAAACTAGCAAGATTCTTGAAAGATTTTCTTGGTCAATATGTCCATGGTGACAAAAAGGGATTCTTCCAGCGTGCAGAATCTGAAGCCAGACGGCTTTCAAATGCAGCTTTTGGAGTTAATATGTTACATACTATCGGCTATATATATTCAAGACAGGCGGCACAAGAACTAGGGAAAAAGGCTATCTATCTTGGCGTGCCATTTCTTGCAGAATGGGTTCGAAATAAAGGACATTTCTGGAAATCACAGTTCACAGCTGCCAAAGGTGCTTTTCAATTACTGCAGCTTCAAGAAGATATCCGCAAGCAATTTAAAATGGATAGTAGTGGCCCTGAAAATGATGTGGAATCTCATATTCGCCTAAATAAGGATACACTGATCAATTCTTTGTGGAAGTTAAATGTAGTGGATATTGAAGTAACCCTTGTACATGTGTGTCAAATGGTCCTTAGGGAAAACAACGTCAAGAAGGAAGAACTTAAAGTTCGGGCTGGCGCTCTCAAAACTCTTGGGAAGATATTTCAGGAAAAGAATTCAATAGGAGGAGCAGCCCCGAAGAAGAAAATTGCTGCTGATTCTGATGATGAAGGAAGTAGTTCTGATTCTTCTGAGGATGAATCACCAAGAGCACTTTCCTATCGAACCCCCTTTTTCACTCAGGGTGTTGGTAGGCTCTTCAAATGCCTTTGTAATCCAGCATTTGATGTGGATGATGAAGAGATAGTTTACAGAAGCAAATGA 1170 0.412 MVKETEYYDILGVSPSAADDEIRKAYYQKALQVHPDKNPNDPQAAEKFQVLGEAYQVLSDPVQRNAYNRNGKHSVSRETMLDPMAVFALLFGSELFEDYIGHLAVASMASSGLADESEDPDKLHEKLKASMFGNSVVQKEREEKLARFLKDFLGQYVHGDKKGFFQRAESEARRLSNAAFGVNMLHTIGYIYSRQAAQELGKKAIYLGVPFLAEWVRNKGHFWKSQFTAAKGAFQLLQLQEDIRKQFKMDSSGPENDVESHIRLNKDTLINSLWKLNVVDIEVTLVHVCQMVLRENNVKKEELKVRAGALKTLGKIFQEKNSIGGAAPKKKIAADSDDEGSSSDSSEDESPRALSYRTPFFTQGVGRLFKCLCNPAFDVDDEEIVYRSK 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1041 389 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 2 339 - -
Glsi08g1041 389 ProSiteProfiles dnaJ domain profile. 6 71 IPR001623 -
Glsi08g1041 389 CDD DnaJ 6 60 IPR001623 -
Glsi08g1041 389 PRINTS DnaJ domain signature 43 63 IPR001623 -
Glsi08g1041 389 PRINTS DnaJ domain signature 8 26 IPR001623 -
Glsi08g1041 389 PRINTS DnaJ domain signature 26 41 IPR001623 -
Glsi08g1041 389 SUPERFAMILY Chaperone J-domain 2 101 IPR036869 -
Glsi08g1041 389 ProSitePatterns Nt-dnaJ domain signature. 48 67 IPR018253 -
Glsi08g1041 389 Pfam DnaJ domain 6 68 IPR001623 -
Glsi08g1041 389 MobiDBLite consensus disorder prediction 328 354 - -
Glsi08g1041 389 SMART dnaj_3 5 63 IPR001623 -
Glsi08g1041 389 Gene3D DnaJ domain 1 85 IPR036869 -
Glsi08g1041 389 Pfam X-domain of DnaJ-containing 138 321 IPR026894 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1041 Glsi-ChrGlsi08 7652068 7656855 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1041 7 68 C2H2 Transcription Factor Family AT1G74250 43.284 1.53e-09 57.8