Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1036 ATGTCATTAGTTAGATCTGCAGAGCTGGCTACATCCTATAGAAATGCCAAACTCTACTCACTAAAGGGAACTGATGTTAAACCTGGCTTGTCCTCCCAAATTTTTGGTCCTGATAAACATAGAAGCATGTACACGACTGATTCTTACTCCAGTGAGAGTTATGAGAAATACTTCCATGATTCACCAACAGAAGAACTGGTAGAACCATCTAGTTCTGGCATCTCAAGCAATTCATTTCACCCAGATGATGCTTCTTACCAGCCCAGAGCTAGTTCAGGAGCTTCTAAGGTTGCTAATAATCCATTTGATACTTCTTTCATGTCCATGAGGCATCATGATGCCTATCAGTCCAACTTTAGATCAGATTTCTTGGGAAATGAAAGCCTGGATGCGCTTGAGTTTAATGGTCAAATGAGATTAAAACTACAAGAATTAGAGAGGGCCCTGCTTGATGATAATGGGGATGACGATGATGAGGAAGACGTATTCGGGACTGCTCAAAGCATGGAAATTGACACGGAGTGGGCTGATCCCATTCAAAATATGCCGCTCCATGAGTCACCAAAGGAGTCTATTTCCTCAGATTCTAATCTTAGCAGCATCAGTAGCAACAAAGAAATATCACATAACTCTCCACGGACCCCTAAGCAATTGCTTCTTGAATGTGCTGGTGTACTTTCAGAAGGAAATGTAGAGGAAGCATCAGCTATGATAAATAATCTCCGGCAGATGGTCTCAATTCAGGGAGAACCTCCCGAGAGAATTGCAGCCTATATGGTGGAAGGACTTGCGGCTCGCATGGCTGCTTCTGGTAAATGTATCTATAAAGCTCTGAAATGCAAGGAACCTCCTTCTTCAGACCGTCTAGCAGCCATGCAGATACTTTTTGAAGTGTGTCCATGCTTTAAATTTGGATTTATTGCTGCAAATGGTGCAATTACAGAGGCAGTTAAAGATGAAAAGAAGGTTCATATAATAGATTTTGACATCAATCAAGGAAGCCAATACATAACTCTAATACAAACACTTGCTTCGAGGCCAGGTAAGCCACCTCATGTGAGATTGACTGGGGTTGATGATCCTGAGTCTGTTCAGCGACCTGTTGGAGGCCTAAAGATCATAGGGCAAAGACTAGAAAAGCTGGCAGAAGCACTTGGATTGCCATTTGAGTTTCGAGCAGTGGCATCAAGGGCATCAATTGTCACTCCTTCAATGCTCAACTGTCGTCCTGGGGAAGCACTTGTGGTGAACTTTGCATTCCAGCTTCATCACATGCCTGATGAGAGCGTTTCAACGGTAAACGAACGAGACCAGCTTCTCCGCATGGTCAAGAGCCTAAATCCAAAACTTGTAACAGTTGTGGAACAAGATGTGAACACCAACACTACTCCCTTTTTCCCGAGATTTGTTGAATCCTACAATTATTATTCTGCCGTTTTTGAGTCTCTTGATGCAACTCTTCCTAGGGAGAGTCAGGACAGGATGAATGTTGAAAGGCAATGCTTAGCAAGAGACATTGTCAATATTGTTGCATGCGATGGTGAGGATAGGATAGAACGGTATGAAGTTGCTGGGAAATGGAGAGCAAGGATGGCTATGGCTGGCTTCACTTCATGCCCAATGAGCACACATGTAACTGATTCAATTCGGAAACTCATTAAGCAGTACTGCGACAGGTACAAGATAAAGGAGGAAATGGGAGCACTTCATTTTGGGTGGGAAGACAAAAACTTGATTGTTACTTCAGCATGGAGGTGA 1758 0.4317 MSLVRSAELATSYRNAKLYSLKGTDVKPGLSSQIFGPDKHRSMYTTDSYSSESYEKYFHDSPTEELVEPSSSGISSNSFHPDDASYQPRASSGASKVANNPFDTSFMSMRHHDAYQSNFRSDFLGNESLDALEFNGQMRLKLQELERALLDDNGDDDDEEDVFGTAQSMEIDTEWADPIQNMPLHESPKESISSDSNLSSISSNKEISHNSPRTPKQLLLECAGVLSEGNVEEASAMINNLRQMVSIQGEPPERIAAYMVEGLAARMAASGKCIYKALKCKEPPSSDRLAAMQILFEVCPCFKFGFIAANGAITEAVKDEKKVHIIDFDINQGSQYITLIQTLASRPGKPPHVRLTGVDDPESVQRPVGGLKIIGQRLEKLAEALGLPFEFRAVASRASIVTPSMLNCRPGEALVVNFAFQLHHMPDESVSTVNERDQLLRMVKSLNPKLVTVVEQDVNTNTTPFFPRFVESYNYYSAVFESLDATLPRESQDRMNVERQCLARDIVNIVACDGEDRIERYEVAGKWRARMAMAGFTSCPMSTHVTDSIRKLIKQYCDRYKIKEEMGALHFGWEDKNLIVTSAWR 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1036 585 MobiDBLite consensus disorder prediction 65 97 - -
Glsi08g1036 585 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 192 580 IPR005202 -
Glsi08g1036 585 MobiDBLite consensus disorder prediction 186 213 - -
Glsi08g1036 585 MobiDBLite consensus disorder prediction 60 97 - -
Glsi08g1036 585 Pfam GRAS domain family 216 585 IPR005202 -
Glsi08g1036 585 ProSiteProfiles GRAS family profile. 206 585 IPR005202 -
Glsi08g1036 585 MobiDBLite consensus disorder prediction 181 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1036 Glsi-ChrGlsi08 7615465 7617222 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1036 1 585 GRAS Transcription Factor Family AT1G21450 64.924 0.0 735
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Glsi08g1036 GRAS 8.2e-137 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g1253 10 8455580 8457214 Glsi08g1036 08 7615465 7617222 CCT
Glsi08g1036 08 7615465 7617222 Glsi08g1036 08 7615465 7617222 ECH