Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1033 ATGCCAAAAGAACAAAATCGAGCATTTCGTTTGAGTGTTCCAATTCGAGAAATACGGAGTTTTGAGAACGCTGATTTGTCTCCGAAGTATCCATCACCTGTCTTAGAGAGAATGCATTCCTCGGAGGATAAAAGGGAAGCCGTGCGTGGTGACGAGGATGATTCCGCCGGTGATAAGCAAAGCAGCACTTTCTTCGATGTCTATGGACCTCAAGGCAAGGCAGAAATTGTTTTTAAGGCTCCAGAAGCTAATTCAACTTTGAATCTCCAGGACATTCAAGGACTCGTCACTTGGGTTCTTGCTGAAGGATTTATGCCATCATGGGTTTTTATTAAGAATAAGCCTCTTATTCCAAAAGTGGTTATGCTTTATATGCCAGGCCTGGATGCAGCTTTGTACTTGTCACAGTCTAAAATGCTTCCCAATTTAAAAAAATTCTGTGGTAATCCAATGGCAGTCTTAGCTCTTAGCTGTGTATCAGATAGAATGCAGACGATAGATGCACTCCTAACATGCAAGCTGAAAAGAAAGAGGGATGAAAGTAGTTCAGTTATGAAGAAATCTACACCAATATCTCAACAAGAAAAAAGCGGTGGTGGTACAGATGGTCTATCATTCATGGAGCTTACAAAAAACATACCTTTTCCTGTTTCGTATTATACACTTACAGATAAAGAACTAGAAGAGAATGGATATTTATTTAATCAGCCAGGTTTTCTTTCTACTTTGCCTTCTCCTTTGGGATCTTCTCCATATGACATGTTGGCTCTTGATTGTGAAATGTGCATAACAAACGAGGGTTTTGAGCTTACAAGAGTTACCCTAGTGGATGTCAAAGGAGAGGTTGTGCTAGATAAATTGGTTAAACCATCAAATGCTATAATTGATTACAATACCAGGTTTAGCGGTATAACACCTGAGATGTTAAATGGGGTGACTACAAATTTGAAAGACATTCAGGAAGAATTTCTAAAGCTGGTGTACAAAGAGACTATCCTAGTTGGGCATTCTACTGAAAATGATTTGTTAGCACTGAAGATATCTCATGATTTGGTCATTGACACGGCAGTATTATACAAGCACCCTCGAGGTTCATCTCATAAAACTGCTCTACGTATTCTTGCTAAGAGATTTCTTTCCTGGGAAATACAGCAATCAGGGAATGGACATGACAGCATTGAAGATGCTAGAGCTACAATGAAATTGGCACTATTAAAGATAAGAAATGGACCTGACTTTGGTTCCCCTCCATCCTTCATGCGGAAAAAGCTCCCTTCCATATTGAGCGAGTCTGGCAAAACTTCTTCTTTGATTGATGATATATCCATAGTAAAACGATATGCCTCTGAGTCCTCGCATTCAATTCCTGTGACTTCTGATGATGATGCACTTGCAAGGACCACCAAGGAGGTGAAGAATGAAAAGGTACATTTTGTCTGGACACAGTTTTCAGAATTACATTCATACTTAAAGAAACAAGCAGAAGATTCAGAGATCTTGAATAGGAGACTTGCAGAGATGATGTCATTGCTTACTTGTCAGAAGAATTCTGCAAAAGGTAAAGGCATCAAGTTGAGTGCAACTGCTGAATTGAAGGAAATTCTAGCTCACATGGATGCTAGAATTCATAGTCTGTATAGGTCATTACCCTCTAATGCTATGTTGATAATTTGCACGGGTCATGGAGACACAGCAGTTGTCCACAGACTGAGGAGAATGCTTGCTGAGCAGAGTGAAGCTACTATATGTCGTGAGAAGATTGTGGAAATCCTAGAAGAGGTTCAGGCCCGAGCCGAGGTAGCCTTGTGTTTTGTAGAGGAGCAATTAAGCGTCGCTCATATATATACATCCTCCATTCTCAACTCTCCCGAGTCCAGGCTTGGCTCTACAAACAGGACAGAGGGGATGCGTGGAAAGCCAAGTGTCAATGCATTCCACGTGGAACGCGTGGTTGCATCCAGAAAGCAGTCGAGCCGGTTGCTCGTTCTCGATTTCGTCAAGGCACACGGCGCATTCGGAACTCGTGACCAGCTCTTTCCCAGTGATTCTGGGCAAATTCTCCAGCTCCGAAGCCGACAAGCCCTTGTGGCTAGTGGCGTCACAAAGAAGGCACAGAATATGGATGGGAAATTGTGGAAATCAATGGAGATAAGAGATTTTGGTTGTGAGGAGTGGAGGGTGGAGGAGAGGCTTCGCTCTTTGGCTTTATGTACCATATTTTGGTGA 2226 0.4209 MPKEQNRAFRLSVPIREIRSFENADLSPKYPSPVLERMHSSEDKREAVRGDEDDSAGDKQSSTFFDVYGPQGKAEIVFKAPEANSTLNLQDIQGLVTWVLAEGFMPSWVFIKNKPLIPKVVMLYMPGLDAALYLSQSKMLPNLKKFCGNPMAVLALSCVSDRMQTIDALLTCKLKRKRDESSSVMKKSTPISQQEKSGGGTDGLSFMELTKNIPFPVSYYTLTDKELEENGYLFNQPGFLSTLPSPLGSSPYDMLALDCEMCITNEGFELTRVTLVDVKGEVVLDKLVKPSNAIIDYNTRFSGITPEMLNGVTTNLKDIQEEFLKLVYKETILVGHSTENDLLALKISHDLVIDTAVLYKHPRGSSHKTALRILAKRFLSWEIQQSGNGHDSIEDARATMKLALLKIRNGPDFGSPPSFMRKKLPSILSESGKTSSLIDDISIVKRYASESSHSIPVTSDDDALARTTKEVKNEKVHFVWTQFSELHSYLKKQAEDSEILNRRLAEMMSLLTCQKNSAKGKGIKLSATAELKEILAHMDARIHSLYRSLPSNAMLIICTGHGDTAVVHRLRRMLAEQSEATICREKIVEILEEVQARAEVALCFVEEQLSVAHIYTSSILNSPESRLGSTNRTEGMRGKPSVNAFHVERVVASRKQSSRLLVLDFVKAHGAFGTRDQLFPSDSGQILQLRSRQALVASGVTKKAQNMDGKLWKSMEIRDFGCEEWRVEERLRSLALCTIFW 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1033 741 MobiDBLite consensus disorder prediction 36 59 - -
Glsi08g1033 741 MobiDBLite consensus disorder prediction 24 63 - -
Glsi08g1033 741 Gene3D - 251 411 IPR036397 GO:0003676
Glsi08g1033 741 CDD REX1_like 255 404 IPR034922 -
Glsi08g1033 741 MobiDBLite consensus disorder prediction 181 201 - -
Glsi08g1033 741 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 59 424 IPR047021 GO:0004527
Glsi08g1033 741 SMART exoiiiendus 253 412 IPR013520 -
Glsi08g1033 741 Pfam Exonuclease 256 402 IPR013520 -
Glsi08g1033 741 MobiDBLite consensus disorder prediction 185 200 - -
Glsi08g1033 741 FunFam RNA exonuclease NEF-sp 250 414 - -
Glsi08g1033 741 SUPERFAMILY Ribonuclease H-like 254 407 IPR012337 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1033 254 402 C2H2 Transcription Factor Family AT3G27970 28.824 3.55e-08 54.3