Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1029 ATGAGAAAGGGAGAGTGATTCGTGCGAAAGCCGTTTGAAGGTTGGTTATTTGACGGCGGTAGCGCAATTGTAATGTTCAGAATCAAAGATTGTTGCTTGCTTTTGGTTTTCTTTGGTCTATGGCTTGTATTTGGTAAAACTCAACACCAGAGGCTCTGGAACAATTCTTACCCATTTCTGTTGGCTCACAGTAAAGCCTCTAAAGCTTATAGCCTTGCAATTTGGTTTGAAATACTATCTGGGTTGAGCTACCTCAATATTGATAAGATGGTACCTCCGGGGCCACCCACTCCGATTGGTGGTGCCCAGTCTGTCTCACCCTCCCTTTTGAGATCGAATTCTGGAATTTTGGGGGCTCAAGGGGGTCCTGTGCCTTCACAGACTTCTTTTCCTTCGCTTGTGTCACCACGCACTCAGTTTAACAGCATGAACGTGCTAGGAAATATGTCCAATGTGTCTTCTATACTGAATCAGTCTTTCCCAAATGGGGTTCCAAATTCTGGGATCTCTGGTCCTGGAAGTAACCAGCGTGGGGGTGTGGATGCCGGAGCCAAAACAGATCCTCTTTCCAGTGTTGGCAATGGAATGAGCTTCAATAATACTTCATCTTCGTTTGTACAATCAAATATGGTGAACCCTGGTTCATCTGGTCAAGGTCAGGGTCAACAATTTTCAAATCCTTCTGGCAATCAGCTATTGCCAGATCAACAGCATTCCCAACAAATGGAACCTCAAAATTTCCAACATAGTCAGCAGTCAATGCAACAGTTCTCAGCTCCTCTGAACCCTCAGCAACAACAGCAGCAGCATTTTCAATCAATTCGAGGAGGGATAGCTGGCATTGGACCAGTAAAGTTGGAACCCCAGGTAAACAACGATCAACTTGGACAACAGCAACAGCAACAGCAACAGCAGTTGCAATCATTGAGGAATCTTGCTCCAGTGAAATTGGAACCTCAACAAATTCAAACAATGAGAACTATGGCACCAGTAAAAATGGAGCACCAACATCCTGATCAGTCATTATTTTTGCATCAGCAGCAGCAGCAACAGCAGCAGCAGCAACAACAGCAATTCCTTCACATGTCAAGGCAGTCCTCTCAGGCTGCTGCTGCTCAGATGAATAATATATTGAACCACCAGAGACTTTTGCAATTACAACAGCATCAGCAGCAACAACTCTTAAAGTCAATGCCTCAACAACGGCCCCAACTACCACAGCAGTTTCAACAGCCGAATATGCCTATAAGGTCTCCTGTGAAACCAGTATATGAACCTGGAATGTGTGCAAGGCGGCTGACCCATTACATGTATCAGCAGCAGCATAGACCTGAAGATAACAACATTGAGTTCTGGAGGAAATTTGTTGCTGAGTATTTTGCTCCTAATGCCAAAAAGAAGTGGTGCGTTTCTATGTATGGAAGTAGCAGACAAACAACTGGAGTTTTTCCTCAGGATGTATGGCAATGCGAAATATGTAATCGCAAACCTGGACGTGGGTTTGAAGCAACTGTTGAGGTTCTTCCCAGGCTTTTCAAAATCAAGTATGAAAGTGGTACTTTAGAAGAGCTTCTTTATGTTGACATGCCTCGCGAATATCATAATTCCTCTGGTCAGATTGTGCTGGATTATGCTAAAGCAATACAAGAAAGTGTTTTTGAGCAACTTCGTGTTGTTCGTGATGGTCAACTTCGAATAGTTTTTTCTCCAGACCTAAAGATATGCTCTTGGGAATTTTGTGCTCGGCATCATGAAGAGCTTATCCCAAGAAGACTGTTAATACCTCAGGTTGGTCAGCTTGGAGCTGCTGCTCAAAAATACCAGGCTTTTACTCAAAATGCAACACCTAATTTATCTGTTCCGGAATTACAAAATAATTGCAATTTGTTTGTTGCATCAGCCCGTCTGTTGGCAAAAGCCCTAGAAGTGCCATTAGTTAATGATTTAGGATATACCAAGAGATATGTGCGGTGTCTACAGATATCTGAAGTGGTAAATAGTATGAAAGACTTGATAGATTACAGCAGAGAAACAGGGACTGGACCTATGGAGAGCTTGGCCAAATTCCCCCGGAGAACTAGTGGTTCATCTGGACTTCATAGTCAAAATCAACAGCCTGAAGATCAAATACAGCAGCAACAGCAAATGGTGGCCCATAACTCAAATAGTGATCAAAATCCAGCAGCTGCCGTGCAAATAGCTTCTAGCAATGGTGTAGTTAGTGTAAATAACTGTGTTAACTCAGCATCTGCATCAACCACCGCAAGCACCATTGTTGGACTTCTCCACCAAAACTCTATGAATTCTAGACAACAAAATTTTATGAACAATGCCAGCAGTCCATATTCTGTTCAGATTCCGTCCCCAGCATCTTCTGGTACAGTGCCACCAGCGCAACCAAACCCATCACCCTTTCAATCACCAACGCCATCTTCATCTAACAACCCACCACAAACATCTCACTCTGCTTTAGCAGCTGCCAGTCACATGAATACATCGAACTCACCAGCTAATATTTCCTTGCAACAACAGCAGGCATCTCTTTCTGTTGAAGCTGACCCCAGTGATCAGAGTTCAGTCCAGAAAATTCTAAACGAGATGTTGTCCACCCAGGGTAATGGCACTGGTGGAATGGTTGGCGTTGGTTCTCTTGGAAATGATGTCAAGAATGTAAATGGGATCCTGCCAGTGAGTACCAGTACAAGTCTCAACAATGGCAACTGCCTGGCAGGCAATGGAGCTGTGAATAGTAATTCAGGTGTTGGAGCTGGTGGATATAGTACAATGGGTGGTGGGCTTGGTCAATCTGCTATGGTCAATGGAATCAGAGCTGCAATAGGAAATAACTCTATCATGAATGGGAGGGGAGGAATGGCAACTATCGCTCGAGACCAAGCTATGAATCATCAACAAGATTTATCAAACCAACTACTTAGTGGGCTAGGAGCAGTAAATGGTTATAATAATCTTCAATTTGATTGGAAACCTTCCCCGTGA 2997 0.4368 MRKGEXFVRKPFEGWLFDGGSAIVMFRIKDCCLLLVFFGLWLVFGKTQHQRLWNNSYPFLLAHSKASKAYSLAIWFEILSGLSYLNIDKMVPPGPPTPIGGAQSVSPSLLRSNSGILGAQGGPVPSQTSFPSLVSPRTQFNSMNVLGNMSNVSSILNQSFPNGVPNSGISGPGSNQRGGVDAGAKTDPLSSVGNGMSFNNTSSSFVQSNMVNPGSSGQGQGQQFSNPSGNQLLPDQQHSQQMEPQNFQHSQQSMQQFSAPLNPQQQQQQHFQSIRGGIAGIGPVKLEPQVNNDQLGQQQQQQQQQLQSLRNLAPVKLEPQQIQTMRTMAPVKMEHQHPDQSLFLHQQQQQQQQQQQQQFLHMSRQSSQAAAAQMNNILNHQRLLQLQQHQQQQLLKSMPQQRPQLPQQFQQPNMPIRSPVKPVYEPGMCARRLTHYMYQQQHRPEDNNIEFWRKFVAEYFAPNAKKKWCVSMYGSSRQTTGVFPQDVWQCEICNRKPGRGFEATVEVLPRLFKIKYESGTLEELLYVDMPREYHNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARHHEELIPRRLLIPQVGQLGAAAQKYQAFTQNATPNLSVPELQNNCNLFVASARLLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRETGTGPMESLAKFPRRTSGSSGLHSQNQQPEDQIQQQQQMVAHNSNSDQNPAAAVQIASSNGVVSVNNCVNSASASTTASTIVGLLHQNSMNSRQQNFMNNASSPYSVQIPSPASSGTVPPAQPNPSPFQSPTPSSSNNPPQTSHSALAAASHMNTSNSPANISLQQQQASLSVEADPSDQSSVQKILNEMLSTQGNGTGGMVGVGSLGNDVKNVNGILPVSTSTSLNNGNCLAGNGAVNSNSGVGAGGYSTMGGGLGQSAMVNGIRAAIGNNSIMNGRGGMATIARDQAMNHQQDLSNQLLSGLGAVNGYNNLQFDWKPSP 998
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1029 998 MobiDBLite consensus disorder prediction 389 421 - -
Glsi08g1029 998 MobiDBLite consensus disorder prediction 156 309 - -
Glsi08g1029 998 MobiDBLite consensus disorder prediction 340 374 - -
Glsi08g1029 998 MobiDBLite consensus disorder prediction 770 792 - -
Glsi08g1029 998 MobiDBLite consensus disorder prediction 290 309 - -
Glsi08g1029 998 MobiDBLite consensus disorder prediction 793 811 - -
Glsi08g1029 998 MobiDBLite consensus disorder prediction 770 860 - -
Glsi08g1029 998 MobiDBLite consensus disorder prediction 156 174 - -
Glsi08g1029 998 MobiDBLite consensus disorder prediction 336 374 - -
Glsi08g1029 998 MobiDBLite consensus disorder prediction 190 274 - -
Glsi08g1029 998 Coils Coil 292 312 - -
Glsi08g1029 998 MobiDBLite consensus disorder prediction 389 415 - -
Glsi08g1029 998 MobiDBLite consensus disorder prediction 690 730 - -
Glsi08g1029 998 Pfam LIM-domain binding protein 432 686 IPR029005 -
Glsi08g1029 998 PANTHER LIM DOMAIN-BINDING PROTEIN 315 986 IPR029005 -
Glsi08g1029 998 MobiDBLite consensus disorder prediction 812 860 - -
Glsi08g1029 998 MobiDBLite consensus disorder prediction 675 730 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1029 Glsi-ChrGlsi08 7580846 7588558 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1029 90 994 C2H2 Transcription Factor Family AT1G43850 62.025 0.0 768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g1029 08 7580846 7588558 Glsi08g1029 08 7580846 7588558 ECH