Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1018 ATGTTATGGCACTGGGGTGAAAAGAATTGGACAGAAGATGCTACTGTTCACAATTTCCCACCTGCCATCACTTTCTTTGCCAAGAAAAGGAAGTCGGAATCTGAGCCAGTTCTTGAACCCACAATTGTCGAAGAAGTATCAATGGACGATGAAGAGGACGTCCTGGATGAATTTGAATATGTTCTTGATTGCATAGAGGCATCAGGGGATGACGTTGGCGACGGTGATGACTATTATGACGGAGAAGAGTATGGAGATGACGATGTTGAACTCTATGTAGGTGATGGAGGCGGCGGAGGTGGAATTTCCCTTGCTGGAACATGGTGGGATAAAAAAGCACTGGCGATTGCTGAAGAGGTTACTAGGTCTTTTGATGGTGACTTGCATATATATGCTTTCAAAACATTGCTCAATTCCACTATTCAAGTGCGCATCGAGAAGCTTTCGAATAAGTCTGGCTCCCCCAGCATGGAAGATATTGAAGCCTTTTCTACATCCTATAGAGCACGGTTAGATGAAGCAGAGCTTGCCAAATTTGTGCCTGAAGATATAAGTTTGGAGGTGTCATCTCCTGGTGTTGAAAGGATAGTCCGGATTCCAAATGACCTAGATCGATTCAAGGATCGACCTATGTATGTGAAATATGTCAGCAACGAGGATTCAAAAGATCCATCTGCAGAAAGTGATGGTGTCTTCAGGCTTATAACCTTTGACATGGAAACAAAATGTTGCACCTGGGGTTTAGCAGATGTAAGAGTAAATAGACAGAAAGCAGGTAAAGGAAGACCAATGAGCAAAAAGCAAAGAGAGTGGCGTATAAGCACTCCCTTTGATGCCTTGCGTTTAGTACGGTTGAGCGGGTTTAGGCCTTTAGCATATTTATCTAAGGATTCTCAGGGAATGGACAAAGGGTTGTTGTTTTGTGAGGGTCTTAGGATTGTTGGGATGGGAAGGTGTTGGTTGGTTGGAGTTTTGATGGTACTGAGCTATGCGTGGTTCCTGGGTATTGAGGTGGAAGGGTACCCAATTGAGGATCTGGTGGCGAGATTGCCTGGCCAACCCAAGGTCGGGTTTAGGCAGTATGCAGGTTATGTTGATGTAGATGTCAAGCATGGAAGGAGTTTGTTCTACTACTTTGTGGAGGCAGAAAATGCCCCTCACCACAAGCCCCTCACCCTTTGGCTCAATGGAGGTCCGGGATGTTCCTCCATTGGAGGAGGTGCCTTTACTGAATTGGGTCCATTTTATCCTAAAGGCGATGGCCGCGGTCTCCGAAAAAATTCATTATCTTGGAATAGAGCATCCAACCTCCTCTTTGTGGAGTCTCCTGCCGGAGTTGGTTGGTCATACTCAAATACAACTTCTGATTATAACTGTGGAGATGAGTCCACTGCCAATGATATGTACTTGTTCATGCTGAAATGGTACGAGAAGTTTCCAACATTCAGATCAAGGGAGCTATTCCTCAGTGGAGAAAGTTATGCAGGACATTACATACCACAGTTGGCTAATGTGCTACTGGACCATAACTCTCGTTCAACTGGATTCAAATTCAATATCAAAGGAGTTGCTATTGGAAACCCACTGCTGAAACTTGACAGGGATGCTCCGGCAACATATGAATACTTCTGGTCACATGGGATGATTTCTGATGAGATTGGCCTTGCCATTATGAATGATTGCGATTTTAATGATTATGTGCTTTCAAGTGCTCACAACGTATCCTATTCATGCGACCAAGCCATATCTGAAGCAAACCGCGTTGTTGGAGATTATATAAACGGTTATGATGTGATTCTGGATGTTTGTTATCCATCCATAGTCGAGCAAGAGCTGAGATTGAAGAAGATGGCTACTAAAATAAGTTTAGGCATTGATGTTTGTATGAGTTATGAAAGAAGTTTCTATTTCAATCTCCCTGAGGTTCAGAAGGCCCTCCATGCAAACCGTACCAATCTACCTTACAGCTGGTCTATGTGCAGTGGAGTTTTAAATTATAACGATCCTGATGGTAATATTAACATCCTTCCAATTCTCCAAAGGATAGTTCAGAATCATATTCCAGTCTGGGTTTTCAGTGGAGACCAAGATTCAGTGGTGCCATTGCTGAGTTCCCGAACACTCATTCGAGAACTAGCTCGTGACATGAAGTTGAAGATTACAGTTCCATATGGAGCTTGGTTCCACAAAGGCCAGGTTGGAGGTTGGGTAACGGAGTACGGAAATTTGCTGACATTTGCCACTGTAAGAGGAGCTGCTCACATGGTACCATATGCGCAGCCATCAAGAGCACTCCATCTCTTCAGTTCATTTGTGCGTGGACGTAGGTTGCCAAATACCACACGTCCTTCCATTGATTGA 2361 0.4405 MLWHWGEKNWTEDATVHNFPPAITFFAKKRKSESEPVLEPTIVEEVSMDDEEDVLDEFEYVLDCIEASGDDVGDGDDYYDGEEYGDDDVELYVGDGGGGGGISLAGTWWDKKALAIAEEVTRSFDGDLHIYAFKTLLNSTIQVRIEKLSNKSGSPSMEDIEAFSTSYRARLDEAELAKFVPEDISLEVSSPGVERIVRIPNDLDRFKDRPMYVKYVSNEDSKDPSAESDGVFRLITFDMETKCCTWGLADVRVNRQKAGKGRPMSKKQREWRISTPFDALRLVRLSGFRPLAYLSKDSQGMDKGLLFCEGLRIVGMGRCWLVGVLMVLSYAWFLGIEVEGYPIEDLVARLPGQPKVGFRQYAGYVDVDVKHGRSLFYYFVEAENAPHHKPLTLWLNGGPGCSSIGGGAFTELGPFYPKGDGRGLRKNSLSWNRASNLLFVESPAGVGWSYSNTTSDYNCGDESTANDMYLFMLKWYEKFPTFRSRELFLSGESYAGHYIPQLANVLLDHNSRSTGFKFNIKGVAIGNPLLKLDRDAPATYEYFWSHGMISDEIGLAIMNDCDFNDYVLSSAHNVSYSCDQAISEANRVVGDYINGYDVILDVCYPSIVEQELRLKKMATKISLGIDVCMSYERSFYFNLPEVQKALHANRTNLPYSWSMCSGVLNYNDPDGNINILPILQRIVQNHIPVWVFSGDQDSVVPLLSSRTLIRELARDMKLKITVPYGAWFHKGQVGGWVTEYGNLLTFATVRGAAHMVPYAQPSRALHLFSSFVRGRRLPNTTRPSID 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1018 786 FunFam Carboxypeptidase 341 605 - -
Glsi08g1018 786 PRINTS Carboxypeptidase C serine protease (S10) family signature 427 439 IPR001563 GO:0004185|GO:0006508
Glsi08g1018 786 PRINTS Carboxypeptidase C serine protease (S10) family signature 475 500 IPR001563 GO:0004185|GO:0006508
Glsi08g1018 786 PRINTS Carboxypeptidase C serine protease (S10) family signature 744 757 IPR001563 GO:0004185|GO:0006508
Glsi08g1018 786 PRINTS Carboxypeptidase C serine protease (S10) family signature 440 450 IPR001563 GO:0004185|GO:0006508
Glsi08g1018 786 PANTHER OSJNBA0006B20.18 PROTEIN 31 285 - -
Glsi08g1018 786 SUPERFAMILY alpha/beta-Hydrolases 338 781 IPR029058 -
Glsi08g1018 786 SUPERFAMILY YhbC-like, N-terminal domain 136 194 IPR035956 -
Glsi08g1018 786 Gene3D alpha/beta hydrolase 343 604 IPR029058 -
Glsi08g1018 786 Pfam RimP N-terminal domain 138 194 IPR028989 -
Glsi08g1018 786 Gene3D - 628 664 - -
Glsi08g1018 786 FunFam Carboxypeptidase 675 774 - -
Glsi08g1018 786 Pfam Serine carboxypeptidase 352 774 IPR001563 GO:0004185|GO:0006508
Glsi08g1018 786 ProSitePatterns Serine carboxypeptidases, serine active site. 489 496 IPR018202 GO:0004185
Glsi08g1018 786 Gene3D - 675 774 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1018 Glsi-ChrGlsi08 7509353 7518361 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1018 635 777 Calmodulin-binding Proteins AT2G22960 25.874 6.55e-10 57.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g1018 08 7509353 7518361 Glsi08g1018 08 7509353 7518361 ECH