LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Glsi08g0997	ATGTCGATAGAAGAGAATGGCACAACATTATATATAAGAACTTGCATGATTCTACCGCCTCAGGTGAATTCCAGGAGCATATGGGGATCCGAATTTGGGCAGTTTCTGACAAGTTCTTTGCCAACGTTGGAGTTGCAAATGTCTCTCATTTATTTTGGGACGCTTTTCTTCCATATCTTTCTAGGCCGTATAAGAATCCCCAGATTCACTTCTATGATCATTACAGGCTTAATCTTTGGTACTACTCTCAACAGAGAATGGGCCGAGAAGGGAAAGATTCTGTTCTCCTTTGATTCACAAGAATGCCTGGGATTAGTTTCGGTGTTCGGTTACCTTTTGTTTCTCTTCTATATTGGAGTTAAAACGGATATGAGTATGATCCTTAGGACGGGAAGAAACGCCATGAACATTGGAGCTATTGCGATATTGGGTCCATTCCTGTGTGGTATGATCGTCCAGAAATACATCTCATCACAATACTTAGACACAGAGCAGCGCAGAAAGCTTCAATTTATCGTTGGGTTGCTATGCCTTACCCCTTTTCCAGTCATTTCCTCCGTTTTAAGCGATCTAAAGGTCTTGAATTCGGAGCTGGGACGACTAGGCCTGTCCTCAGCAATAGTCAGCGAAATGTTAAGTATATTTTTGGTCTGCACGGTATCATTCGGTAACGTTATTGTAAATCAAGGTAAATTAAAAGCTTTGATGGGTGTGGGATTAGTTGTGCTGTTAGTTGTCGTGATTGTGCTCCTCTTTCGCCCCGCTATGTTTTGGATTATAAAACAGACACCAGAGGGTTGCCCTGTCAATGATCACTACGTTTATTGCATACTTACGATAGCTCTCTTATCGTCCTATGCCACACATCAGTTTAATTTTTTTGCTCTCTTGGGGCCTTATATCTTGGGTTTGGCTATCCCAGAAGGACCCCCATTAGGGACTGCCATTGTTAAGAAGATTGATACCTTTGTTAATGGTATTCTGATGCCAGTCTTCGTGACTACATGTGCCATGAGGGTGGATCTCAAAGACTTGACGAATTGGAGGAACCAAACAGACAGGAAACTTGACGCGTTTATGGTACAAGTATCCTTTCTTGTTGTTGTGACTTTTGTTGCCAAACTTGTTGCATGCATGCTACCTCCATTGTACAGCAAGATGCCCTTGAAAGATGCGGTGACTCTCTCATTGATTATGAGCTGCAAAGGCATAGTCGAAATGGCCAGTTCTTCCTTCCTCAGAGATATCGTAGGTATACCCGACAACGTCTTCACCTTGCTGATGGTGTGCATGACATTCAATGCTACACTTTTGCCCATCCTCTTGAGTTTTCTCTACGATCCTTCCAAGAAATATGCAGGTTACACAAAGAGGAATATCGTGGATCTGAGAACCAACACCGAGCTTCGAGTTCTGACTTGCATTCACAGATCCGACAACATTCCCCCAGCAATCAACCTACTGGAGGCAGCTTACCCAACCAAAGAAGAGCCCCTTTGTGTGCATGTGCTTCACCTTATAGAGCTGATTGGCAGAGCAACCCCTGTTTTTATCTCCCACCAATTGCAGAAGAAGACCAAATCAAGGAGCTCCTTTGTCGATAACCTGCTTGATGCTTTTGAGAGCTTTGAGCAAGAGTTCAAGGGCGCTTTATCGGTGAACACCTTCACGGCCGTGTCCCCAGCGGAGATGATGAACGACGACATTTGCATGCTGGCACTTGACAAGCTCGCATCCCTCATAGTTCTCCCATTCCATCAAAAATGGTCATCAGATGGGAGTAGCATTGAGTTAGATGACAAATCTATAAGAGACTTAAACAATAGTGTACTCGAAAGAGCTCCTTGCTCTGTGGGAATCATAATTGAGAGGGCACAAATGTCCCACATATTCTCCCCCGAGACACCCTACTCTGTTTGTTTGATCTTCATAGGAGGAAAGGATGACAGGGAGGCATTTTTCTTTGCCAAGAGAATGACAAAAAACCCTCACGTTAGACTCTCTGTGATTCGATTCAGAGCTTCTGAAAGCACAGACGTGGATGTCAAAGACTGGGAGGGAATGCTAGAAACCGAGTTGCTTAGTGACATTAAGATGAACCACAGGGTTGGGGATGCTCATGTGAAATACAGAGAAGAGACAGTGAAAGATGGACCCGAGACGGCTCTGATAGTTCGTTCACTGGTGAATGAGCATGATCTGCTAATTGTTGGGAGAAGAGATGGAGTTGAGAGTCCTCAAACTTCTGGGCTATTGCAATGGAGTGAGTACCCAGAACTTGGGGTGTTGGGGGACCTGCTTGCTTTTGTTGCTGGCAGAGCTTCTATTTTTATTATGCAACAACAAAGAACAGTGTCGGAGTTGTAA	2367	0.4415	MSIEENGTTLYIRTCMILPPQVNSRSIWGSEFGQFLTSSLPTLELQMSLIYFGTLFFHIFLGRIRIPRFTSMIITGLIFGTTLNREWAEKGKILFSFDSQECLGLVSVFGYLLFLFYIGVKTDMSMILRTGRNAMNIGAIAILGPFLCGMIVQKYISSQYLDTEQRRKLQFIVGLLCLTPFPVISSVLSDLKVLNSELGRLGLSSAIVSEMLSIFLVCTVSFGNVIVNQGKLKALMGVGLVVLLVVVIVLLFRPAMFWIIKQTPEGCPVNDHYVYCILTIALLSSYATHQFNFFALLGPYILGLAIPEGPPLGTAIVKKIDTFVNGILMPVFVTTCAMRVDLKDLTNWRNQTDRKLDAFMVQVSFLVVVTFVAKLVACMLPPLYSKMPLKDAVTLSLIMSCKGIVEMASSSFLRDIVGIPDNVFTLLMVCMTFNATLLPILLSFLYDPSKKYAGYTKRNIVDLRTNTELRVLTCIHRSDNIPPAINLLEAAYPTKEEPLCVHVLHLIELIGRATPVFISHQLQKKTKSRSSFVDNLLDAFESFEQEFKGALSVNTFTAVSPAEMMNDDICMLALDKLASLIVLPFHQKWSSDGSSIELDDKSIRDLNNSVLERAPCSVGIIIERAQMSHIFSPETPYSVCLIFIGGKDDREAFFFAKRMTKNPHVRLSVIRFRASESTDVDVKDWEGMLETELLSDIKMNHRVGDAHVKYREETVKDGPETALIVRSLVNEHDLLIVGRRDGVESPQTSGLLQWSEYPELGVLGDLLAFVAGRASIFIMQQQRTVSEL	788

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Glsi08g0997	788	PANTHER	CATION/H + ANTIPORTER	22	783	-	-
	Glsi08g0997	788	Gene3D	-	42	453	IPR038770	-
	Glsi08g0997	788	Pfam	Sodium/hydrogen exchanger family	51	443	IPR006153	GO:0006812\|GO:0015297\|GO:0016020\|GO:0055085\|GO:1902600

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Glsi08g0997	Glsi-ChrGlsi08	7391524	7394039	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Glsi08g0997	15	767	Antiporter Super Family	AT3G44900	39.849	0.0	552