Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0984 ATGGAATTCCAAACACATCATGCTAGTAAACAGAAAGTGCATCCTGTTCTGAAAGCAGAGGAGGATTCAAGTGACGATTTTGAACGCTCTCTAATTCAAAGTGCACTAAACTTGACTGACCATACCCTGACCAAATCCATTCCTTCAACCTATAATTCTTGGGTGGTGCGACACCCTTCTGCGTTGCGCTCATTTGATACATTAATGAAAGCAGCCATTGGGAAGAGAATGGTCGTTTTTTTAGACTACGACGGTACCTTATCACCCATCGTAGATGACCCTGATCGTGCTTTTATGTCTGATGAGATGCGTGCAGCAGTCTGTGAAGTTGCTGAATATTCTCCGACAGTGATAATTAGTGGAAGAAGTAGAGAAAAGGTACAAGATTTTGTGAAGCTAAGTAATGTCCATTATGCTGGAAGCCATGGGATGGACATAATGGCACCACCAATGCCGGGCAATGGAGATCCTTTTCAACCTGCCAAGAAGTTTTTGCCTGCAATTCGAGAGGATTATAGCGTATTGGAGGAGAAGATGAAGTCGGTGCTTGTAAAACATCCAGAATTTTGCTTAACTGAGGGTAAAAAGGTTATCGAAATAAGGCCATCCATAGAATGGAACAAAGGTCGTGCCGTAGAATATTTCCTTGACACACTAGGGTTAATTAGCAGCTCCAGTAATATCCTTCCCCTGTATATTGGTGATGATCGATCTGATGAAGATGCCTTTAAGGTCATTCAGAACAGTGGACATGGTTACCCAATTATAGTGTCTTCAATTCCAAGAGATACAAAAGCTTTGTACTCTTTGATTGACCCATCGGAAGTTTTAGCTTTCTTGTCTCGGCTGGCAAAATGGAGAAAAACCTCTTCCTCAAGCAGGTCTTTAAACTTTTATTGA 900 0.4167 MEFQTHHASKQKVHPVLKAEEDSSDDFERSLIQSALNLTDHTLTKSIPSTYNSWVVRHPSALRSFDTLMKAAIGKRMVVFLDYDGTLSPIVDDPDRAFMSDEMRAAVCEVAEYSPTVIISGRSREKVQDFVKLSNVHYAGSHGMDIMAPPMPGNGDPFQPAKKFLPAIREDYSVLEEKMKSVLVKHPEFCLTEGKKVIEIRPSIEWNKGRAVEYFLDTLGLISSSSNILPLYIGDDRSDEDAFKVIQNSGHGYPIIVSSIPRDTKALYSLIDPSEVLAFLSRLAKWRKTSSSSRSLNFY 299
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0984 299 NCBIfam trehalose-phosphatase 187 285 IPR003337 GO:0003824|GO:0005992
Glsi08g0984 299 MobiDBLite consensus disorder prediction 1 20 - -
Glsi08g0984 299 Gene3D - 77 154 IPR023214 -
Glsi08g0984 299 Gene3D - 168 297 IPR023214 -
Glsi08g0984 299 Pfam Trehalose-phosphatase 80 181 IPR003337 GO:0003824|GO:0005992
Glsi08g0984 299 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 34 181 IPR044651 GO:0004805|GO:0005992
Glsi08g0984 299 SUPERFAMILY HAD-like 78 287 IPR036412 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Glsi08g0984 Glsi-ChrGlsi08 7277245 7280376 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0984 75 292 Trehalose Biosynthesis Gene Families AT1G23870 28.302 5.05e-08 52.4