LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Glsi08g0984	ATGGAATTCCAAACACATCATGCTAGTAAACAGAAAGTGCATCCTGTTCTGAAAGCAGAGGAGGATTCAAGTGACGATTTTGAACGCTCTCTAATTCAAAGTGCACTAAACTTGACTGACCATACCCTGACCAAATCCATTCCTTCAACCTATAATTCTTGGGTGGTGCGACACCCTTCTGCGTTGCGCTCATTTGATACATTAATGAAAGCAGCCATTGGGAAGAGAATGGTCGTTTTTTTAGACTACGACGGTACCTTATCACCCATCGTAGATGACCCTGATCGTGCTTTTATGTCTGATGAGATGCGTGCAGCAGTCTGTGAAGTTGCTGAATATTCTCCGACAGTGATAATTAGTGGAAGAAGTAGAGAAAAGGTACAAGATTTTGTGAAGCTAAGTAATGTCCATTATGCTGGAAGCCATGGGATGGACATAATGGCACCACCAATGCCGGGCAATGGAGATCCTTTTCAACCTGCCAAGAAGTTTTTGCCTGCAATTCGAGAGGATTATAGCGTATTGGAGGAGAAGATGAAGTCGGTGCTTGTAAAACATCCAGAATTTTGCTTAACTGAGGGTAAAAAGGTTATCGAAATAAGGCCATCCATAGAATGGAACAAAGGTCGTGCCGTAGAATATTTCCTTGACACACTAGGGTTAATTAGCAGCTCCAGTAATATCCTTCCCCTGTATATTGGTGATGATCGATCTGATGAAGATGCCTTTAAGGTCATTCAGAACAGTGGACATGGTTACCCAATTATAGTGTCTTCAATTCCAAGAGATACAAAAGCTTTGTACTCTTTGATTGACCCATCGGAAGTTTTAGCTTTCTTGTCTCGGCTGGCAAAATGGAGAAAAACCTCTTCCTCAAGCAGGTCTTTAAACTTTTATTGA	900	0.4167	MEFQTHHASKQKVHPVLKAEEDSSDDFERSLIQSALNLTDHTLTKSIPSTYNSWVVRHPSALRSFDTLMKAAIGKRMVVFLDYDGTLSPIVDDPDRAFMSDEMRAAVCEVAEYSPTVIISGRSREKVQDFVKLSNVHYAGSHGMDIMAPPMPGNGDPFQPAKKFLPAIREDYSVLEEKMKSVLVKHPEFCLTEGKKVIEIRPSIEWNKGRAVEYFLDTLGLISSSSNILPLYIGDDRSDEDAFKVIQNSGHGYPIIVSSIPRDTKALYSLIDPSEVLAFLSRLAKWRKTSSSSRSLNFY	299

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Glsi08g0984	299	NCBIfam	trehalose-phosphatase	187	285	IPR003337	GO:0003824\|GO:0005992
	Glsi08g0984	299	MobiDBLite	consensus disorder prediction	1	20	-	-
	Glsi08g0984	299	Gene3D	-	77	154	IPR023214	-
	Glsi08g0984	299	Gene3D	-	168	297	IPR023214	-
	Glsi08g0984	299	Pfam	Trehalose-phosphatase	80	181	IPR003337	GO:0003824\|GO:0005992
	Glsi08g0984	299	PANTHER	TREHALOSE 6-PHOSPHATE PHOSPHATASE	34	181	IPR044651	GO:0004805\|GO:0005992
	Glsi08g0984	299	SUPERFAMILY	HAD-like	78	287	IPR036412	-

Showing 1 to 7 of 7 entries

Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Glsi08g0984	Glsi-ChrGlsi08	7277245	7280376	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Glsi08g0984	75	292	Trehalose Biosynthesis Gene Families	AT1G23870	28.302	5.05e-08	52.4

Showing 1 to 1 of 1 entries