Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0983 ATGATGGAGTGCAACAAAGATGAGGCAGTTAGGGCCAAAGAAATAGCAGAGAGGAAATTTTCAGAAAGGGAATATGCTGGTGCAAAGAAGTTTGCTCTCAAGGCTCTAAATTTGTATCCTGCACTGGAGGGTATTTCTCAGTTTTTGACTACTCTTGATGTTTATATCTCTGCTGAGAATAAAGTAAGTGGAGAAATGGATTGGTATGGTATACTTGGAGTGAAACCCTTTGCTGATGATGAGACTGTTAGAAAACAGTACAGAAAGCTGGCTCTCACTCTTCACCCTGACAAAAACAAGTCCTTAGGTGCAGAAGGTGCATTTAAGCTGGTTTCAGAAGCATGGAGTTTGTTATCAGATAAGGCCAAGAGATTAGCATATAACCAGCAGAGGAGTTTGAAAGGATTTCAACATAATACTCCGAACCATGTTAAGTCTCAATCAGAAGCACCCAGTACTAATGGTTTTAATAGTTTCAACAAGAATGTAACTGCTAATGTGAGGAATGGAAATAATAATGCTCGGTCACAACCGACCTCCGTTCCTCCTCCACAAAAAAAAGCTAGCACCTTTTGGACTATCTGTAAGCGGTGCAAGACACATTATGAATATCTCAGGATCTATTTGAATCACACCCTTATTTGTCCCACCTGTAATGAGCATTTCTTGGCTATAGAGAAGGCTCCACCTCCCAATATTTTAAAGTCATCAAATTGGTCTTCTAGCCAACAGCATCAGAAATCTCAACAACATGCTGGAAGTAATAAACCAGGAAGAAATTGTGCAGTTTCTCAAAATACAGAAGCTGGTGATTCTTCAGGCACGTCTTTTAACCACACTAACTTTCAGTGGGGTCCTCACTCTGGAATGGCTGGTTTTGGTAGCACAGATGGATCATCATCTGTTGCTGCTCAAGCTGCAAATGTTGTGCAGAAGGCAAGTGAGAAATTAAGAAGAGAACGTGAGGGAGGACCATCAATTGCTGAAAGGGAGAGGATTCAAATGGCGAAGAGGACTGAAGGTTCTTTTCATAAAGTGGAAAAACCTTTGAAGAAGAGGAGGACAGATGACATTCGCATGAATGGTGATCAGGGATACATGACTAATCATATGGCCATGGGACATGGAGCAGCAGGTTTGGGATGTGTTCCTGAATCAGGAAAGGCTAACTGGGAAACGGAAAAGACCTCTGGATTTTCTGGTACTACCAGCAAGCCTTACAGCATGAGAGAGTTACTAACTTTTGAAATACGAAACATGTTGATGGATAAGGCACGGATTGAAATTCGCAAGAAAGTTGAAGAGTGGAGATCAACAGCTGCAGCTAAGAGCACCAACAAAGACAAAGAGATTAAGAGAAGAAAAAACACATTCAATGACAAAAGGGCTGATCCAGAGAAGCATGGAGAGTCCACTCTTAATGGTAATGGGTATCTGGACAACGATTCTTTCCCTGTCACATCTAATGATACAGTTAAGGAAGACCTAGCCTACGTTACAATCAATGTGCCAGATTCAGATTTTCACAATTTTGACGTGGATAGAACTGAAAATTCTTTTGGGGAAGACCAGGTCTGGGCAGCTTATGACGATGATGATGGAATGCCTCGATATTATGCTCGAATTCACAAGGTGATCTCCTTGGAGCCATTTAGAATGCGGATCAGTTGGCTTAACTCTCGAAGCAATAGTGAACTGGGTCCAATAGATTGGATAGGTTCTGGTTTTTATAAAACATGTGGAGATTTCAGGACTGGCAAGCATGAAATAACTGAAACATTAAATTCATTTTCGCACAAGGTTAGGTGGACAAAAGGCACTAGAGGAATTATTCGCATTTTTCCTGGAAAGGGGGAAGTGTGGGCTCTTTATAGAAACTGGTCTCCAGATTGGAACGAACATACTCCTGATGAAGTGATACACAAGTATGATATGGTGGAGGTGGTTGAAGATTTTGACGAGGAGAAAGGTGTATTAGTTGCCCCACTTATTAAGGTTGCTGGTTTTAGGACTGTGTTTAATAGGCACATGGACCCTGATCAGGTGAGGAGGATTCCTAAAGAGGAGTTGTTTCGCTTCTCACATCAGGTTCCTAATTACTTGCTTTCAGGCGAAGAAGCTCATAATGCTCCAAAAGGTTGTCGAGAGTTGGATCCAGCAGCTACTCCTTTAGACCTCCTGCAGAAAATGACAGAAACTAATGAGGCGTCGGACAATGATAGAAAACCTAGGGAAGACACATTGCCCAGTTCAACTGAAAAGCATACATTTGGGATGGGGGAGAATGCTTCAAAAACTAGTCCAGGAGAAATGGTAGCCGAAGATGGTAAGCTGAGAAAGGATACTAGATGA 2352 0.4184 MMECNKDEAVRAKEIAERKFSEREYAGAKKFALKALNLYPALEGISQFLTTLDVYISAENKVSGEMDWYGILGVKPFADDETVRKQYRKLALTLHPDKNKSLGAEGAFKLVSEAWSLLSDKAKRLAYNQQRSLKGFQHNTPNHVKSQSEAPSTNGFNSFNKNVTANVRNGNNNARSQPTSVPPPQKKASTFWTICKRCKTHYEYLRIYLNHTLICPTCNEHFLAIEKAPPPNILKSSNWSSSQQHQKSQQHAGSNKPGRNCAVSQNTEAGDSSGTSFNHTNFQWGPHSGMAGFGSTDGSSSVAAQAANVVQKASEKLRREREGGPSIAERERIQMAKRTEGSFHKVEKPLKKRRTDDIRMNGDQGYMTNHMAMGHGAAGLGCVPESGKANWETEKTSGFSGTTSKPYSMRELLTFEIRNMLMDKARIEIRKKVEEWRSTAAAKSTNKDKEIKRRKNTFNDKRADPEKHGESTLNGNGYLDNDSFPVTSNDTVKEDLAYVTINVPDSDFHNFDVDRTENSFGEDQVWAAYDDDDGMPRYYARIHKVISLEPFRMRISWLNSRSNSELGPIDWIGSGFYKTCGDFRTGKHEITETLNSFSHKVRWTKGTRGIIRIFPGKGEVWALYRNWSPDWNEHTPDEVIHKYDMVEVVEDFDEEKGVLVAPLIKVAGFRTVFNRHMDPDQVRRIPKEELFRFSHQVPNYLLSGEEAHNAPKGCRELDPAATPLDLLQKMTETNEASDNDRKPREDTLPSSTEKHTFGMGENASKTSPGEMVAEDGKLRKDTR 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0983 783 Pfam DnaJ domain 67 128 IPR001623 -
Glsi08g0983 783 MobiDBLite consensus disorder prediction 437 469 - -
Glsi08g0983 783 MobiDBLite consensus disorder prediction 734 751 - -
Glsi08g0983 783 MobiDBLite consensus disorder prediction 437 484 - -
Glsi08g0983 783 PRINTS DnaJ domain signature 87 102 IPR001623 -
Glsi08g0983 783 PRINTS DnaJ domain signature 69 87 IPR001623 -
Glsi08g0983 783 PRINTS DnaJ domain signature 103 123 IPR001623 -
Glsi08g0983 783 PANTHER BNAC03G44070D PROTEIN 2 723 - -
Glsi08g0983 783 Gene3D DnaJ domain 64 176 IPR036869 -
Glsi08g0983 783 ProSitePatterns Nt-dnaJ domain signature. 108 127 IPR018253 -
Glsi08g0983 783 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Glsi08g0983 783 MobiDBLite consensus disorder prediction 234 283 - -
Glsi08g0983 783 MobiDBLite consensus disorder prediction 136 187 - -
Glsi08g0983 783 CDD DnaJ 67 120 IPR001623 -
Glsi08g0983 783 SMART dnaj_3 66 123 IPR001623 -
Glsi08g0983 783 MobiDBLite consensus disorder prediction 732 783 - -
Glsi08g0983 783 SUPERFAMILY Chaperone J-domain 59 127 IPR036869 -
Glsi08g0983 783 Pfam Domain of unknown function (DUF3444) 500 706 IPR024593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0983 Glsi-ChrGlsi08 7269965 7272316 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0983 5 230 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 32.906 1.25e-29 119