Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0979 ATGATCCCTGTCGGCGCCGGAGATTGGGAGGAGGAGAGAAAGAGCGTTGGGTTTGATAATAAGGAAAAAGAGGTTCATGAGTCGATGAAGATATCATTATCGCTAATGTCGACGGAGGAGGAGGAGGAGGATCGCTCGCTGGTGAGAAACGACGCAGTTTTGGCCGTTTATGAAGGCGACGAATGTGAAGATAATGGCGATGTGGAGCAGTTATCGTACGGTTCAGTATCGTTGAGAGGAAGTAGGAAAGAGATGGAGGATGCGGTGAGCATAAAAATGGGGTGGCGAAAGCGTGCCGGGAACGGTTGCATCGATTGTTGTTTCGCTAAAATGGATAGGGAGGTAGCAGATAATGCCGCCGTGAGGACAGTGGGTTCTACAGCTCTGGTGATGGTGGTAACAAAGGATCAGATCGTCGTGGCTAATTGCGGGGATTGTAGGGCGGTTATGGCAAGAGGAGGTGAGGCCTTCGCCTTGTCTAATGATCATAAGCCTGACAGGCCTGATGAATTGATGCGAATTGAAGCCGCTGGTGGAAGGGTCATAAACTGGAATGGCCAGCGCGTTCTAGGAGTTCTGGCCACTTCGAGATCTATCGGGGACCAGTACCTTCGACCCTATGTAATATCGAAACCAGAAGTGACAGTGACCAAGAGAACTGACAAGGATGAATTCCTTGTACTAGGCAGCGATGGTTTGTGGGATGTCATCTCCAATGAAGCTGCGTGCCAGGTTGTAAGGAAATACCTCAGCTCCCAAATAACAAAAGTTTCCCCTGGGGTTAGCTATCAAAGCCGTGCTGCCGAGGCTGCAGGCCTGTTGGCTGAATTAGCAATGACAAAGGGAAGCAGAGATAACACCAGTGTCATAGTTGTTGAACTGAGGAATCGAAACATCTAG 900 0.4956 MIPVGAGDWEEERKSVGFDNKEKEVHESMKISLSLMSTEEEEEDRSLVRNDAVLAVYEGDECEDNGDVEQLSYGSVSLRGSRKEMEDAVSIKMGWRKRAGNGCIDCCFAKMDREVADNAAVRTVGSTALVMVVTKDQIVVANCGDCRAVMARGGEAFALSNDHKPDRPDELMRIEAAGGRVINWNGQRVLGVLATSRSIGDQYLRPYVISKPEVTVTKRTDKDEFLVLGSDGLWDVISNEAACQVVRKYLSSQITKVSPGVSYQSRAAEAAGLLAELAMTKGSRDNTSVIVVELRNRNI 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0979 299 CDD PP2Cc 72 294 IPR001932 -
Glsi08g0979 299 Gene3D - 96 298 IPR036457 -
Glsi08g0979 299 MobiDBLite consensus disorder prediction 1 21 - -
Glsi08g0979 299 MobiDBLite consensus disorder prediction 7 21 - -
Glsi08g0979 299 PANTHER PROTEIN PHOSPHATASE 102 294 IPR015655 GO:0004722|GO:0006470
Glsi08g0979 299 FunFam Protein phosphatase 2C 50 105 299 - -
Glsi08g0979 299 Pfam Protein phosphatase 2C 51 287 IPR001932 -
Glsi08g0979 299 ProSiteProfiles PPM-type phosphatase domain profile. 72 294 IPR001932 -
Glsi08g0979 299 SUPERFAMILY PP2C-like 70 296 IPR036457 -
Glsi08g0979 299 SMART PP2C_4 62 292 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0979 Glsi-ChrGlsi08 7223089 7225751 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0979 60 295 PP2C-type Phosphatase Gene Family AT2G29380 42.475 1.59e-64 205