Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0971 ATGTCATCGACGCTGCTGGAGGTGAGTCGGGCAGCTCACGAGGAGGTGGAGTGGCTGATAGTGAAGGACCTCCAAAATGAGCCGGCGACGAATAAGGACCGCTTGTTTCAGAGTCGCCGTGTTCGAAACACGATCGATACTATTACCTCTACCGCGGAAAACGCTCATTTTTCTCAGAAGTTCCTTCGAATTAAGATATATAAAGATAAAGACAACGCAAGGAAGGATGAGATTGCTGCACTGGGAGGTCAAACTCCAACCGGAACAAACGTGTTTAGTGCCTTCTATGATAGACTGAAAGAGATACGAGAGTATCATAGAAAGTGCCCACCTGCTCGTGTTGTTGATGCTAACGATGAGTATGATGCACTTCTTACAGAGGAGCCTCACATTGAGTTTAGTGGGGAGGAATTCAAGGGTGAGATATGGGGTAACTATAGTTATTGGGGGCGTAGGGCTTTTGAACGACATTTTAGAGAATGGCGCCATCAACATGGGATGCGCTGCCTTGGTCTACCAAATAGTCAAATACCAAAAACAATGAAATTACATCAATTGAGCCAGGGAAATGTGGAAGAGAGAATACAGGGAAAACAAGGATTGATCAAGTGGCGGCCAGATCTAGAAGAAGAATATGAAGACAAAGAAGGCAACATCTACAACAAGAAGACATACACTGATTTACAGCGCCAGGGACTGATATGA 705 0.4511 MSSTLLEVSRAAHEEVEWLIVKDLQNEPATNKDRLFQSRRVRNTIDTITSTAENAHFSQKFLRIKIYKDKDNARKDEIAALGGQTPTGTNVFSAFYDRLKEIREYHRKCPPARVVDANDEYDALLTEEPHIEFSGEEFKGEIWGNYSYWGRRAFERHFREWRHQHGMRCLGLPNSQIPKTMKLHQLSQGNVEERIQGKQGLIKWRPDLEEEYEDKEGNIYNKKTYTDLQRQGLI 234
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0971 234 PANTHER SPLICING FACTOR SF3A-RELATED 137 224 - -
Glsi08g0971 234 Pfam Splicing factor SF3a60 binding domain 87 108 IPR021966 -
Glsi08g0971 234 Pfam SF3a60/Prp9 C-terminal 135 234 IPR024598 GO:0000398|GO:0003723|GO:0005681
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Glsi08g0971 Glsi-ChrGlsi08 7169360 7172893 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0971 135 234 C2H2 Transcription Factor Family AT5G06160 67.925 2.05e-35 129