Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0968 ATGTATGCAGAGACCGGTCTTCTGTTCCCGTATTTCCAGAATTTCTCTCAAGAACTTCAACAACTCGAGGAATACTGCAAAACCCACAAGTCCAATGCTTCAATGGGTGAACTTGTTCAATCTTCTGCCATGTCAGAGTATGATTTGGCAGCAGAGGGAGATTTGTTCAAAGCTCCCGAACCTATTATGGAAGAACCAGTCATGAACTTGGATCCCATGACAGCAGCTATCTCAATGATATCTTGTGGGGAAGATGTTATCTCCTCCCAGGGACTAAAACCCACAGATATTGATGCTCTTCAAAATGAACAGTTTCTGAGCGAGGTATTCTATGAGTGCGAAAAGGATCTCTTAGAAAAGGCAGCAATAGAGTCACCACTGTCTGAGATTCTGGAAATCAAGGTTCCTTTTCTGAATACAGATGAAAACCAAATTCAAGAAAACAGATCACTTACTGGCATGCCATTACCAAAAAGTGAGAGTTCAGAATGTTTGAGCTCAATGGACTGGATGCAAGGAGCTGCAATGAAACCATCTTTTCTTGATTTCCCAGGAATTGATCTGAACGCAGTTTATGGCATGCGGAGGGCATTTAGTGAAGGAGATATAAAGGCTCTGGGTAATGGTAATATGAACGTTATTCAATCCCCCCATGAGAGGCCCGTTCTTACCAGTAATTGCACCAGTGAGGAACGTCGAGAAAAGCTTTCCAGATACAGGAATAAGAAGACAAAGAGGAATTTTGGCCGGAAAATCAAGTATGCTTGCAGGAAGGCTCTTGCTGACAGTCAACCAAGAATCCGTGGAAGATTTGCCAAGACTGAAGAATTCGATGTCAAGAGGCAATGA 849 0.4276 MYAETGLLFPYFQNFSQELQQLEEYCKTHKSNASMGELVQSSAMSEYDLAAEGDLFKAPEPIMEEPVMNLDPMTAAISMISCGEDVISSQGLKPTDIDALQNEQFLSEVFYECEKDLLEKAAIESPLSEILEIKVPFLNTDENQIQENRSLTGMPLPKSESSECLSSMDWMQGAAMKPSFLDFPGIDLNAVYGMRRAFSEGDIKALGNGNMNVIQSPHERPVLTSNCTSEERREKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTEEFDVKRQ 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0968 282 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 73 274 IPR045281 GO:0009909
Glsi08g0968 282 Pfam CCT motif 232 274 IPR010402 GO:0005515
Glsi08g0968 282 Coils Coil 12 32 - -
Glsi08g0968 282 ProSiteProfiles CCT domain profile. 232 274 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0968 Glsi-ChrGlsi08 7129078 7133485 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0968 207 276 C2C2-CO-like Transcription Factor Family AT5G57660 42.857 1.07e-09 56.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Glsi08g0968 CCT 7.5e-17 CL0281