Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0917 ATGGAAACGTTAGTGCGCCGCTATTGGTTACTTCCCAGTGATGACGAGCGCTTGCCACCTCATTGTTTTGTTGGTCTTGGTGGACCCCGGTTTCTCCGTGCTTTTGAATACATGGGGTTCGCCGGTGGAGATATCAATAACAAACACCACCTGAACTTTCATACGCATATGCCTCATCTCCATTTTTACCGCCATGATAAGAAGGATCTGAAGGGCATTCCAAAAGGGTGTTTGGCAGTCATGGTGGGTCAAGGAGAGGAGCAACAGAGGTTTGTGATCCCTGTGATCTACATCAACCATCCACTCTTCGTGCATTTGTTGAAGGGCGCTGAAGAAGAATATGGGTTTGATCAGAAAGGCCCCATCACCATTCCCTGCCACGTGGAAGAGTTCCGCACCGTCCAAGACATGATTGATCAGGAAAAAACTCACCACCAGCACCATCATCACACTTGGTGCTTTAAAGTTTGA 471 0.4798 METLVRRYWLLPSDDERLPPHCFVGLGGPRFLRAFEYMGFAGGDINNKHHLNFHTHMPHLHFYRHDKKDLKGIPKGCLAVMVGQGEEQQRFVIPVIYINHPLFVHLLKGAEEEYGFDQKGPITIPCHVEEFRTVQDMIDQEKTHHQHHHHTWCFKV 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0917 156 Pfam Auxin responsive protein 68 138 IPR003676 GO:0009733
Glsi08g0917 156 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 67 133 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0917 Glsi-ChrGlsi08 6797958 6800030 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0917 73 132 Calmodulin-binding Proteins AT5G20810 58.333 5.97e-17 72.4