Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0913 ATGGGTGAATTTGGCGTTTCAGACAAGGAAGCTAATAAAAATAGCAGCAGTGATGTTCTTGGGTTCGGTGTGAAGTTGCAGAACCTTGAAGATTTCCCTAGTAAGACGACGACGATGATGGTGCCTCATAATCACCACTACCGTCCACTATCACCCTTTGATAATGATTCCTGGGCTGGCGATGGCGATGGACCCACGACTTACATGTCTATGACTAATCATATAGACCATGTTGTTAGTGGTGCCTCTGCTTCTGGTGCTGCTATTGATAGGGGTGGTGCTGCACTTGTAAGACCCTTGCAGCCTTTTGACGTTTCTATCTCTACTTCTGTTGGCGCCACCACTCGCCCCGCCTTCAAATCTTCAGGGGGGGTGATGGCGGCTTCATTGGGGTTTCCTTTTACAAATGCACAGTGGAAGGAGCTTGAAAGGCAAGCTATGATATACAAGTACATGATGGGTTCTGCTCCTGTTCCTCCTGATCTCCTTATCCCCACAGCCGCTTCTCGCTCTCCCTTGGACAGTGGCTTCAATCTAAGGTTTTCAAGCGGTACAGATCCAGAGCCAGGTAGGTGCAGGAGAACAGACGGGAAAAAATGGAGATGCTCAAGAGACGTGGCGCCTAACCACAAGTATTGCGAGCGCCATATGCACAGAGGCCGTCCCCGTTCAAGAAAGCCTGTGGAAGTTCAAGTTAACAGCAACAACAATCAGCAAATCAAGAGGTCTCGCCGTGATTCTTGTCCTTTTCCTACTGCTGCTGCTACGACTATTTCAAACCCCATCATCAGTAATGAAGCATCTTCATCTCAGTTTCTTTCGTCTCCTACCAGTCAGCCATTCTTTGAATCTTCCCTTTCTCTTGATAAGTTTGGGGTCAAAGCTGCAAATTTTGACTCCGTTACTTCTCTTTCGTCAAATAAGGAACCCAGAGGCTTGGACTGGATGCTGAAAGGAGACCCGATTACCATGGCTGCATCTGAACAAGAATGGCAGCCTCTGATGCAGAACAAAGTTGGACTGAATACCGCAAGTTCCTGTAACAACGACGCCTCTATTTCGAGTTCAAATTACAAAGACCCTTTGTATATGAATTCGCATGCGTTTTTCAATTCTGGGCTAGATCAACACAAAAGACTCTTTCCTCTGTGCCTCAATCCTCTTACGGTTCCAATGGAAAATCCTCAGTCTGTCAAACCAAGGGGTTTCATTGATGCTTGGTGTAATGCAGAAACAGAGGAAAACAATGCCAATGCTAACAAGAACTCTGTTGCATCCGATGCTAAATTATCACTTTCTTCTCTTGATCTATCAATGGGTGGCGGTGGTTGTGTGGGTGAAGACATGGGTACTATCCAAAAGGGTTTAGGCCTAATGGAGTCCGATGGAAACACAGAAAATGGTACTAAAACCCATCTCGCAAATTGGCTCACCCCTGCACCTTGGGTGGCTTCAACTCCAGGGGGGCCACTAGCTGAAGTTTTGAGAGCAAGCACGGTGGCTACCGGTACCACCAACGAGGAAGCCTCCAAACCATCCTCTCCGGTCAGTCCGATGGTAACAATGGTATCATCCCCATCAGGGGTATTGCAGAAAACGCTTGCTTCTTTATCTGATAGTAGTAGCAGTAGCAGCCCAAGGGTTGGGTCTTCAAGGGCCAATTCTGAAATGGCCTTGCAGTGGTTTAATCGGAGCAAATTAGGATCTTCCTCTTGA 1716 0.472 MGEFGVSDKEANKNSSSDVLGFGVKLQNLEDFPSKTTTMMVPHNHHYRPLSPFDNDSWAGDGDGPTTYMSMTNHIDHVVSGASASGAAIDRGGAALVRPLQPFDVSISTSVGATTRPAFKSSGGVMAASLGFPFTNAQWKELERQAMIYKYMMGSAPVPPDLLIPTAASRSPLDSGFNLRFSSGTDPEPGRCRRTDGKKWRCSRDVAPNHKYCERHMHRGRPRSRKPVEVQVNSNNNQQIKRSRRDSCPFPTAAATTISNPIISNEASSSQFLSSPTSQPFFESSLSLDKFGVKAANFDSVTSLSSNKEPRGLDWMLKGDPITMAASEQEWQPLMQNKVGLNTASSCNNDASISSSNYKDPLYMNSHAFFNSGLDQHKRLFPLCLNPLTVPMENPQSVKPRGFIDAWCNAETEENNANANKNSVASDAKLSLSSLDLSMGGGGCVGEDMGTIQKGLGLMESDGNTENGTKTHLANWLTPAPWVASTPGGPLAEVLRASTVATGTTNEEASKPSSPVSPMVTMVSSPSGVLQKTLASLSDSSSSSSPRVGSSRANSEMALQWFNRSKLGSSS 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0913 571 MobiDBLite consensus disorder prediction 218 253 - -
Glsi08g0913 571 MobiDBLite consensus disorder prediction 501 556 - -
Glsi08g0913 571 Pfam QLQ 133 165 IPR014978 GO:0005524|GO:0005634|GO:0006355
Glsi08g0913 571 ProSiteProfiles WRC domain profile. 186 230 IPR014977 -
Glsi08g0913 571 MobiDBLite consensus disorder prediction 228 253 - -
Glsi08g0913 571 PANTHER GROWTH-REGULATING FACTOR 5 121 432 IPR031137 GO:0005634|GO:0006351|GO:0032502
Glsi08g0913 571 SMART QLQ_2 132 168 IPR014978 GO:0005524|GO:0005634|GO:0006355
Glsi08g0913 571 Pfam WRC 187 229 IPR014977 -
Glsi08g0913 571 ProSiteProfiles QLQ domain profile. 133 168 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0913 Glsi-ChrGlsi08 6770055 6772706 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0913 388 542 GRF Transcription Factor Family AT5G53660 37.952 5.66e-17 80.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Glsi08g0913 WRC 6.2e-21 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g0913 08 6770055 6772706 Glsi08g0913 08 6770055 6772706 ECH