Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0912 ATGTTCGTCTCCAAGTGTAAATCTTATAAAACTCCGAGCTTGGAGAACTTCTTGCCCTCCCCCTTAAGGCAGCATAAAAGCGAAAGCACTCAAATCCTTTCCTCTTTCCTTATTCTGTACGTTTCAGCTTTCGGCAGTCTCGAGGGAGGAAGCTCTTGGTTGACTGCTGTGAAAAGGGCTTTCAGGTCTCCAACCAAAGAAAACGATAAGAGAAGCAGCAGGAAGAGAGAAGAGCACGAACAAGAGGAGGAGGAAAAGAAGAGGGGAAAACGAAGATGGATTTTCAGGAAGCCCTTTAGCCAAGAAACCGTAACTCGGGATAGCGAAGAGAGAACCATAACAAGTACGGCTGCTGTGACAGCAGCAACAAGTTCTGAGGTAGTGGACGCTGAGCAAAGACATGCCATTGCAGTAGCCATGGCAACCACAGCAGCTGCTGAGGCAGCAGTAGCAACTGCTCAAGTAGCTGTGGAGGTGGTTCGGCTTGCTTCGCCTTCAATCTTTGTCAGAGAACATAATGCTGCAATTGTTATCCAAACGGCCTTCAGAGGTTATCTGCGAGCCAAGAAGCTTTCGCATGAAGGAAACACTGATTCCAGATTTAGTGATAGCAAGTCCATGTCCAGAGATGAAGATACCACAGTGGATGTCTGGCTTCACTGGGATGACCACCCACAAACGGCAGATAATATCCGAGCTGTTCTACAGAAAACCAAGGAAGTTGCCTTGAAACGTGAAAAGGCCCTGGCGGATGCCTTCTCTCATCAGATATGGAGAACTAGTAGGGAACCTAGCGCCAGTGAGGGAGAGCCTGAAGACAGCCCTAGATGGTCTGACCAATGGAGGAGAAGGTTTAGGGAAAACACAGGTAGAGCTTCGTGTGACCATAGAGACCCTGTAAAAATAGTTGAAATTGACACATTTAGACGCTACTCTAACTTTGCTCCCTCCGATGAGGAGAGATCATCTTGTGGTTATAAACCTCGCTACAATAATCCACTTAGACTTTCTTTGTCTTCGCCTGGGTATAGAGCCCACTACGATCTCTCCCTCCAGTCCCCAATGGCAATGACCCCATCACCAACAAGGATGAAGCATCTTCAGGTGCACTCACCTGGTCCTCGTTGTGCAAAGTCCAACCATTTAATGCCTGATATGCCCGGCATCAGCCACAACCATGGAACAGGTATGACCAATGATGCAAGGCTCACCTCTGCGGTGCCAAATTATATGGCAGTCACTGCATCTGCGAAGGCTCGGTTTCGGTCACAAAGTGCACCAAGACAGAGGCCTTCAACCCCACAAAAGGAAAAAATAGGGTCTGCAAAGAAACGCCTTTCATTCCCAGTTCCAGATCCCTGCAATGGTGCCGGTAATGGAGAAGCTACTTCCAGTCATCACTCTGGGGACCCAATCTTTGAAGACACTGGTTCATGGATGGAGCAGAATTCACATGGCTTTTTGTTTAACAACAAAATCTCTCCACCTGCACCAAGTGATCTCAGGAGGCGGATGAGATCCCAAAAAAATTCTAGTTGGAATGGAGCTTCCTCAAACTCTCGACCTGCATTTCCTCTGGCATCTCTTGGGATTAGAATAAAAGAATCTCTAAATCCAAAGCCAGTGAAATTTCATTTTCACCTATTCATAAAATTTCAGGAATCTGCACTTATCAATATGTTTCGAAGCATACTCAAAGCAGCAAACTTAACTTCTAGGAGCAAGTGCAAGACTAACAGGCATTCAACCTGCCAGGAGTTACATTACAAGCTCACCCTTGTCCACAATTTGAAGTTAGATAACACAACCTTAGATGCTTCATTCTATCTATCACAGGCAGTTGACATGGCTAAAGACCTGAAGTTTGATCTATTCAGACATGACAGCGCTACGCAAGACAAAGAAAACAAAAACAAACAGACAAAACGCAACGCCCCAGGACCACAGTACACTAAACTGAAAATGCTGACGTGCCTTGATGGCGAAATTCAAAGCTGCAAAAACAAGTTTTGTTCACTAGAAAAGAAATACAGGTTGTTCGGATTGTTTGTGTACAAACCTCCCTGA 2067 0.4582 MFVSKCKSYKTPSLENFLPSPLRQHKSESTQILSSFLILYVSAFGSLEGGSSWLTAVKRAFRSPTKENDKRSSRKREEHEQEEEEKKRGKRRWIFRKPFSQETVTRDSEERTITSTAAVTAATSSEVVDAEQRHAIAVAMATTAAAEAAVATAQVAVEVVRLASPSIFVREHNAAIVIQTAFRGYLRAKKLSHEGNTDSRFSDSKSMSRDEDTTVDVWLHWDDHPQTADNIRAVLQKTKEVALKREKALADAFSHQIWRTSREPSASEGEPEDSPRWSDQWRRRFRENTGRASCDHRDPVKIVEIDTFRRYSNFAPSDEERSSCGYKPRYNNPLRLSLSSPGYRAHYDLSLQSPMAMTPSPTRMKHLQVHSPGPRCAKSNHLMPDMPGISHNHGTGMTNDARLTSAVPNYMAVTASAKARFRSQSAPRQRPSTPQKEKIGSAKKRLSFPVPDPCNGAGNGEATSSHHSGDPIFEDTGSWMEQNSHGFLFNNKISPPAPSDLRRRMRSQKNSSWNGASSNSRPAFPLASLGIRIKESLNPKPVKFHFHLFIKFQESALINMFRSILKAANLTSRSKCKTNRHSTCQELHYKLTLVHNLKLDNTTLDASFYLSQAVDMAKDLKFDLFRHDSATQDKENKNKQTKRNAPGPQYTKLKMLTCLDGEIQSCKNKFCSLEKKYRLFGLFVYKPP 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0912 688 MobiDBLite consensus disorder prediction 260 281 - -
Glsi08g0912 688 MobiDBLite consensus disorder prediction 418 436 - -
Glsi08g0912 688 MobiDBLite consensus disorder prediction 418 474 - -
Glsi08g0912 688 PANTHER IQ-DOMAIN 5-RELATED 209 451 - -
Glsi08g0912 688 Coils Coil 72 92 - -
Glsi08g0912 688 MobiDBLite consensus disorder prediction 458 474 - -
Glsi08g0912 688 Pfam Protein of unknown function (DUF4005) 387 458 IPR025064 -
Glsi08g0912 688 ProSiteProfiles IQ motif profile. 171 200 IPR000048 GO:0005515
Glsi08g0912 688 MobiDBLite consensus disorder prediction 265 281 - -
Glsi08g0912 688 MobiDBLite consensus disorder prediction 64 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0912 Glsi-ChrGlsi08 6764488 6769992 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0912 44 506 IQD Protein Family AT1G01110 31.690 2.09e-51 185