Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0893 ATGAGGAACGTGATTGTGGCTGAATGCATTCTTCCAGTAGCCCCAGACTCTAGCTTAGCCGCAAAGGGTGTGGTTCACATGGATGTTATCATGCTGGCTCATAACCCAGGTGGGAAGGAGAGAACAGAGGAAGAGTTTGAGGCCTTGGCTAAGGGATCTGGATTCCAAGGCCTTCGAGTTATGTGCTCTGCTTTCAACACTTATGTCATGGAATTTCTTAAGAAGCTTTAA 231 0.4675 MRNVIVAECILPVAPDSSLAAKGVVHMDVIMLAHNPGGKERTEEEFEALAKGSGFQGLRVMCSAFNTYVMEFLKKL 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0893 76 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 4 72 IPR029063 -
Glsi08g0893 76 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 74 IPR016461 GO:0008168
Glsi08g0893 76 Pfam O-methyltransferase domain 3 56 IPR001077 GO:0008171
Glsi08g0893 76 Gene3D Vaccinia Virus protein VP39 4 63 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0893 Glsi-ChrGlsi08 6650925 6651272 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0893 4 76 Monolignol Biosynthesis Gene Families AT5G54160 71.233 2.72e-32 112