Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0892 ATGGGTTCAGCCGTTGAAATTCAGGTAACCCTAACCCAAGTATCTGATGAAGAAGCCAACATCTTCGCCATGCAATTGGCCAGCGCCTCTGTTCTTCCCATGGTTCTCAAATCAGCCTTAGAGCTCCGTGTCTTAGACATTATTGCCAAGGCTGGCCCTGCATCTTACTTTTCCCCCTCTGACATTGCTTCTCAACTCCCAACAACGAACCCAGACGCACCAGTTATGCTGGACCGAATGTTGCGCCTCTTGGCTAGCTACAATGTCCTCACATACTCTCTGCGCTCACTTCCTGATGGTAGAATTGAGAGGCACAATGGTTTAGCCCTGTTGCTCGATATTTGGTCCAAGAATGAAGATGGTGTCTTTATTGCTGCTCTCTGCCTTATGAATCAGGACAAGGTTCTCATGGGGAGCTGGATGATTGAGGCAAAGATGGGCAGCATGAACATGGTCCTCAAAACTGTGAGTAGACAAGGGATTAATGTTACTTACACATACTTCGCCCGACGATGCTTTGTTAGGTACCACTCGGAAGATGCAGTTCTTGAAGGTGGCATTCCATTCAACAAGGCTTGTGGGATGACTTCCTTTGAATACCATGGCAAAGATCCAAGATTCAACAAGGCATTTAACAAGGGCATGCCTGATCACTCTACTATCGCAATGAAGAAAATTCTGGATACCTATACAGGCTTTGAGGGTCTTAAATCTATGGTTGATGTTGGTGGTGGGATTGGAGCTGTAGTTAATATGATTGTCTCCAAGTACCCCACCATCAAAGGCATTAATTTTGATTTGCCCCATGTAATTGGAGATGCTCCATCTTATCTAGTGACATCTGCAATGCTTATGTGGTTTCAGTGGATATGTTATGACTGGAGCGATGAGCACTGCTTGAAATTTATAGAAGTTTCTTAA 921 0.4484 MGSAVEIQVTLTQVSDEEANIFAMQLASASVLPMVLKSALELRVLDIIAKAGPASYFSPSDIASQLPTTNPDAPVMLDRMLRLLASYNVLTYSLRSLPDGRIERHNGLALLLDIWSKNEDGVFIAALCLMNQDKVLMGSWMIEAKMGSMNMVLKTVSRQGINVTYTYFARRCFVRYHSEDAVLEGGIPFNKACGMTSFEYHGKDPRFNKAFNKGMPDHSTIAMKKILDTYTGFEGLKSMVDVGGGIGAVVNMIVSKYPTIKGINFDLPHVIGDAPSYLVTSAMLMWFQWICYDWSDEHCLKFIEVS 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0892 306 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 177 304 IPR029063 -
Glsi08g0892 306 Gene3D - 1 111 IPR036388 -
Glsi08g0892 306 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 24 306 IPR016461 GO:0008168
Glsi08g0892 306 Pfam O-methyltransferase domain 178 280 IPR001077 GO:0008171
Glsi08g0892 306 Pfam Dimerisation domain 34 85 IPR012967 GO:0046983
Glsi08g0892 306 Gene3D Vaccinia Virus protein VP39 116 304 IPR029063 -
Glsi08g0892 306 SUPERFAMILY "Winged helix" DNA-binding domain 15 109 IPR036390 -
Glsi08g0892 306 PIRSF O-mtase 3 149 IPR016461 GO:0008168
Glsi08g0892 306 PIRSF O-mtase 171 305 IPR016461 GO:0008168
Glsi08g0892 306 PANTHER O-METHYLTRANSFERASE 23 303 IPR016461 GO:0008168
Glsi08g0892 306 FunFam Caffeic acid 3-O-methyltransferase 3 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0892 Glsi-ChrGlsi08 6621687 6633585 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0892 1 304 Monolignol Biosynthesis Gene Families AT5G54160 57.911 7.56e-122 352