Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0859 ATGGAGGTGTTTTTGGTAATGAAGCTAGCTTCTTCGGCTGCTGTTGTGGGCATATTCAGCTGGCTACTTTATCTGTATACTACTCTCTGGCTCAAGTCCGAAAGGGTGAGAAGGAAGCTCCGAATGCAAGGTATTAAAGGGCCTCCGCCTTCTTTTCTGTATGGGAATCTAACTGATATGCAGAGACTCCAATCTCAGGCCACCAACATCGAAGCTCCCAGCAACCATTCCGATCTGTTTGTGGCTCACGACTATACTTCCACCCTCTTCCCATATTTCGAACACTGGAGAAAAGAATACGGTCTACTATACACTTACTCTACAGGGATGAAGCAACACCTATATGTGAACCAACCAGAACTGGTGAGAGAGATGAATCAGAGTATCACTTTGGATTTGGGTAAGCCTTCTTACATCACCAACAAACTTGCACCCCTGCTTGGAAATGGCATTTTAAGAGCCAATGGGATTAGTTGGGCACACCAGAGGAAACTCGTTGCAGCTGAGTTCTTCATGGACAAGGTTAAGGGAATGGTAGGCCTAATGATAGAGTCAGCGCAGCCTTTACTAACAAAATGGGATCAATTAATTGAGGCTCAAGAAGGTGCCACTACTGCGGAAGTTAAAGTTGATGCAGATTTGAGGGGTTTCTCAGCTGATGTTATTTCAAGGGTTTGTTTTGGCCATTCTTATTCTAAAGGAAAGCAAGTTTTCTCAAAGCTCAGGAGCATCCAGAAGGCCATGTCCAAGCAAGGTGGCTTCCTTTTTGGACTCAGTGGTTTTCGAGGCAAAATTTTCAAGACAAAGAAGCAAAGCGAAATAAGCAGTTTGGAAAGAGAGATAGAGTCACTGATCTGGGAGTTAGTGGAGGAGCGCAAGCGAGAATGCTCAGAGACATGCTCATCTGAAAAGGATCTGATGCAGTTACTGCTGGAAGCAGCCATGACTGATCAAAGTCTAGGGAAGGAGTTTTCCAAGCGATTCATAGTGGACAATTGCAAGAACATTTACTTTGCTGGGCATGAAACCACTGCTGTTGCTGCCTCTTGGTGCTTGATGCTTCTTGCTTCATTCCCAGAATGGCAAACTTCCATTAGGACCGAGGTGGCTGAACTTTGCCCTTATGGCATCCCAGATGCAGATTCTCTCCCCCTGCTCAAAACGGTGACTATGGTGATTCACGAAGTGCTACGTTTATATCCACCGGCAGCCTTTGTGTCAAGGGAGGCATATGAAGATATCCAAATAGGAAACCTTAATGTGCCTAAAGGGGTTTGTTTATGGACTCTGATCCCAACGTTGCACAGAGACCCTGAAATTTGGGGACCAGATGCAAATGAGTTCAAACCAGAAAGGTTCAGTGATGGTGTGTCCAAAGCTTGCAAGTTTCCTCAAGCATATGTGCCGTTTGGATTGGGTAATCGCATGTGCTTGGGGAAGAACTTTGCAATGGTGCAACTGAAGGTTGTGTTGGCCCTCATAATCTCCAAGTTCAGCTTTTCTCTTTCGCCCAGTTATAGGCATTCTCCAGCATATAGAATGATTGTAGAGCCAGGACATGGCGTGTATATCCTCGTTCGGAAGATTTCACCCGAGTCCTGA 1602 0.4551 MEVFLVMKLASSAAVVGIFSWLLYLYTTLWLKSERVRRKLRMQGIKGPPPSFLYGNLTDMQRLQSQATNIEAPSNHSDLFVAHDYTSTLFPYFEHWRKEYGLLYTYSTGMKQHLYVNQPELVREMNQSITLDLGKPSYITNKLAPLLGNGILRANGISWAHQRKLVAAEFFMDKVKGMVGLMIESAQPLLTKWDQLIEAQEGATTAEVKVDADLRGFSADVISRVCFGHSYSKGKQVFSKLRSIQKAMSKQGGFLFGLSGFRGKIFKTKKQSEISSLEREIESLIWELVEERKRECSETCSSEKDLMQLLLEAAMTDQSLGKEFSKRFIVDNCKNIYFAGHETTAVAASWCLMLLASFPEWQTSIRTEVAELCPYGIPDADSLPLLKTVTMVIHEVLRLYPPAAFVSREAYEDIQIGNLNVPKGVCLWTLIPTLHRDPEIWGPDANEFKPERFSDGVSKACKFPQAYVPFGLGNRMCLGKNFAMVQLKVVLALIISKFSFSLSPSYRHSPAYRMIVEPGHGVYILVRKISPES 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0859 533 Coils Coil 267 294 - -
Glsi08g0859 533 Gene3D Cytochrome P450 28 530 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi08g0859 533 SUPERFAMILY Cytochrome P450 84 527 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi08g0859 533 Pfam Cytochrome P450 87 505 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi08g0859 533 PANTHER CYTOCHROME P450 FAMILY MEMBER 22 521 - -
Glsi08g0859 533 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 470 479 IPR017972 GO:0005506|GO:0016705
Glsi08g0859 533 PRINTS E-class P450 group I signature 328 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi08g0859 533 PRINTS E-class P450 group I signature 217 235 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi08g0859 533 PRINTS E-class P450 group I signature 467 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi08g0859 533 PRINTS E-class P450 group I signature 348 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi08g0859 533 PRINTS E-class P450 group I signature 97 116 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi08g0859 533 PRINTS E-class P450 group I signature 477 500 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi08g0859 533 PRINTS E-class P450 group I signature 390 408 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi08g0859 533 PRINTS P450 superfamily signature 339 356 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi08g0859 533 PRINTS P450 superfamily signature 477 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi08g0859 533 PRINTS P450 superfamily signature 391 402 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi08g0859 533 PRINTS P450 superfamily signature 468 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0859 Glsi-ChrGlsi08 6419572 6424030 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0859 121 526 Cytochrome P450 AT5G24900 57.664 3.22e-180 511
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g0859 08 6419572 6424030 Glsi08g0859 08 6419572 6424030 ECH