Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0847 ATGTACACAAACAAAGGCGTCTTCTCAGCTCTTGACAATGCCAGGACGCAATTCTACCATTACATGGCAATTGTGATCGCAGGGATGGGATTCTTCACTGATGCATACGACCTCTTCTGCATCACTGCTGTGGCCAAGCTTATAGGTCGCCTTTACTACTTTGACCCCACAAGTCATGACCCAGGAAAGCTTCCAAAGCAAGTGAACAACGCCATAACAGGGGTCGCTTTGTGCGGAACCCTGGCAGGGCAACTCTTCTTTGGCTGGTTAGGTGACAAGCTCGGTAGAAAAAAGGTGTACGGGATAACTCTTGCCATTATGGTAGGATGTGCCTTGGCATCAGGACTTTCCTTTGGCTCCACATCCAAAAGTATGGTTTCAAGTCTCTGCTTCTTCCGGTTCTGGTTGGGATTTGGCATTGGAGGCGACTACCCACTCTCAGCTGTTATAATGTCTGAATATGCCAATCAGAAAACCCGAGGAGGTTTTATTGCTGCTGTATTTGCAATGCAAGGAATAGGAATATTGGTTGCCGGAGCTGTGGCCATGTTTGTTTCAAAACTGTTCTTAGCATCTTACCCAGCTGTTGATTTTGCAATTGACCCAGTGCGATCTACTCAACCAGAGGGAGACCTTCTTTGGCGAATTGTGCTCATGTTTGGTGCACTTCCTGCAGCCCTCACCTTTTACTGGAGAATGAAGATGCCAGAAACTGCTAGGTACACTGCATTGGTCGAAGGAGATCACAAGAAGGCTGCTCAAGATATGGCCAAAGTTCTTGAAAAGGACATACCTTTTCAAGAGTCAAGTTCCAAGCTTGCTGTCAACCCAAGCCCTTCTTATGGATTCCTCTCCTCAGAGTTTCTAGAGAGACATGGGCTCCACCTTCTTGGGACTACTAGCACTTGGTTCTTGTTGGATATTGCCTTCTATAGTCTTCAACTTGCGCAGAAAGATATCTACCCAGCCAGTGGACTTGTACATAAGGCGTCAAAAATGAATGCCATAGAAGAGGTGTTTCAGATCTCCAGAGCTATGTTTGTGGTGGCCCTGCTAGCCACGGTCCCTGGGTACTGGTTCACTGTGTTTCTCGTTGATAAGATTGGAAGGTACAAAATCCAGCTCGGTGGCTTCCTGTTAATGTCTATCTGTATGGCGTTCCTTGGATATAATTATGGAGAATACAGGGGAGAGAAGGATAAATGCCCGCCAGGGGAAGAAAAGGAATATTGTGGTGGCAACCCGGCGATGTTTGCCATACTTTTTGGACTTACCCTCTTCTTTGCTAACTTTGGGCCCAATAGCACCACATTTATAGTGCCTGCAGAACTCTTCCCAGCTAGGTTTCGTTCAACATGCCATGGGATATCAGCAGCAGCAGGAAAAGCAGGGGCCATCATTGGTGCCTTTGTGGTTCAGAGCTATACCAGTGATAATTCAACAAAAGGTATCCAACAAGCAATTATGGCACTTTCAGTTGTCAACTTGGCTGGATTCTGTTTCACCTTGTTGGTGCCAGAAACAAAAGGCCGGTCACTAGAAGATATCTCAGGAGAAGATAAGGAACTCCGTGGAATTGGAAATCATTCTGCAGATGAGAAAACAGAGAACGCAAAAGAGGAAACAAGAAACGCTAGTATTGATAAATCTACAGGAACCGTAATTGTTTAG 1671 0.459 MYTNKGVFSALDNARTQFYHYMAIVIAGMGFFTDAYDLFCITAVAKLIGRLYYFDPTSHDPGKLPKQVNNAITGVALCGTLAGQLFFGWLGDKLGRKKVYGITLAIMVGCALASGLSFGSTSKSMVSSLCFFRFWLGFGIGGDYPLSAVIMSEYANQKTRGGFIAAVFAMQGIGILVAGAVAMFVSKLFLASYPAVDFAIDPVRSTQPEGDLLWRIVLMFGALPAALTFYWRMKMPETARYTALVEGDHKKAAQDMAKVLEKDIPFQESSSKLAVNPSPSYGFLSSEFLERHGLHLLGTTSTWFLLDIAFYSLQLAQKDIYPASGLVHKASKMNAIEEVFQISRAMFVVALLATVPGYWFTVFLVDKIGRYKIQLGGFLLMSICMAFLGYNYGEYRGEKDKCPPGEEKEYCGGNPAMFAILFGLTLFFANFGPNSTTFIVPAELFPARFRSTCHGISAAAGKAGAIIGAFVVQSYTSDNSTKGIQQAIMALSVVNLAGFCFTLLVPETKGRSLEDISGEDKELRGIGNHSADEKTENAKEETRNASIDKSTGTVIV 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0847 556 SUPERFAMILY MFS general substrate transporter 11 518 IPR036259 -
Glsi08g0847 556 ProSiteProfiles Major facilitator superfamily (MFS) profile. 23 509 IPR020846 GO:0022857
Glsi08g0847 556 FunFam Inorganic phosphate transporter 1-6 19 534 - -
Glsi08g0847 556 MobiDBLite consensus disorder prediction 521 556 - -
Glsi08g0847 556 MobiDBLite consensus disorder prediction 521 546 - -
Glsi08g0847 556 CDD MFS_PhT 24 509 - -
Glsi08g0847 556 Pfam Sugar (and other) transporter 24 517 IPR005828 GO:0016020|GO:0022857|GO:0055085
Glsi08g0847 556 Gene3D MFS general substrate transporter like domains 20 533 IPR036259 -
Glsi08g0847 556 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 20 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0847 Glsi-ChrGlsi08 6353901 6355571 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0847 6 519 Inorganic Solute Cotransporters AT5G43350 59.924 0.0 645