Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0838 ATGACTACTCTTTACCCAGAAAATGTCTCAGAAAGGAGGAAGAGCATGATCAGAGAGCTCACTCAGGGTCATGAATCTGCCACCCAGCTCAAGGTTTTGCTTCAGAAGCCTCTTCAGGCTGATGGGTCTCTCACAGCTAAGGAACTTGCAGCCAATATTCTGAGATCTTTCACCGAAACTCTCTCTTTTCTGACTTCCTCTGAAGCCGGTGGTGAGGTTGATCGGGATCCGGCAATTTCTGGTGAAAATGGGTCACCAGTGGTAGCTTCGTGCAATGATCGGCGGTCTGAAGATTCGAGCCAGAGTAAGAAGAGATCAACGCCGGCTACAAAGGATCGGAGGGGCTGCTACCAAAGAAGGAAGACTGCACCTTCGTGGACCTTAGTCTCCCAATCTACTAATGATCATCATGCATGGAGAAAGTACGGACAGAAGGAAATCCAGAATTCTAAATTCCCCAGGAGTTACTTCAGGTGCACTCGCAAGTGTGAAGGCTGCCGGGCTGTAAAACAGGTTCAGCGGATACAAGAGGATCCAGAACTGTACCGTACTACGTACATTGAATTTCATACATGCAAAGAGGCTCCCGAAATGGTCACAGAATCTGGTAATTGGGAATCACTTTCTGTGCCCGAAACAAAGGTGTCAAACGAACAGCGGCATGGTCCTTTCAGCTCATCAACCCCAACTATAAAGCAAGAATATCCCAAAGAAGACACGCCACTAAGTGATATAACAGACAACTTGGACCCTAGTACTCTGTGGTCAGATTTTAAGGATTTCGAACTTTCCGAGCCCTCAATTATGCCCTCAAAGATGGCGTCTTTTGAAGTGGAATCTGTTGATTTTGACGCTGGTTTCCCCTTTGATTAG 873 0.4685 MTTLYPENVSERRKSMIRELTQGHESATQLKVLLQKPLQADGSLTAKELAANILRSFTETLSFLTSSEAGGEVDRDPAISGENGSPVVASCNDRRSEDSSQSKKRSTPATKDRRGCYQRRKTAPSWTLVSQSTNDHHAWRKYGQKEIQNSKFPRSYFRCTRKCEGCRAVKQVQRIQEDPELYRTTYIEFHTCKEAPEMVTESGNWESLSVPETKVSNEQRHGPFSSSTPTIKQEYPKEDTPLSDITDNLDPSTLWSDFKDFELSEPSIMPSKMASFEVESVDFDAGFPFD 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0838 290 MobiDBLite consensus disorder prediction 67 130 - -
Glsi08g0838 290 SMART WRKY_cls 133 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi08g0838 290 MobiDBLite consensus disorder prediction 96 119 - -
Glsi08g0838 290 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 19 220 IPR044810 GO:0003700
Glsi08g0838 290 MobiDBLite consensus disorder prediction 212 248 - -
Glsi08g0838 290 ProSiteProfiles WRKY domain profile. 134 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi08g0838 290 Pfam WRKY DNA -binding domain 134 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi08g0838 290 Gene3D WRKY domain 117 187 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi08g0838 290 MobiDBLite consensus disorder prediction 212 234 - -
Glsi08g0838 290 SUPERFAMILY WRKY DNA-binding domain 131 193 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0838 Glsi-ChrGlsi08 6288819 6290528 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0838 12 197 WRKY Transcription Factor Family AT3G56400 41.176 7.57e-41 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Glsi08g0838 WRKY 6.9e-23 CL0274