Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0837 ATGGAAGACGCCACTCATTCATTAATTTCCCGTGCTTGTGAATTAGCCAGAAACCTTGAATCAAACTTACCCAGCTTGGCCAAACAGCCAGATATGCTATCCATGTCCATTGATGAGATAGTAAAAATACTTTTTGCTGCTCAACAAAGGCTATTTTCCCAACACCAAACACCTTCTTCCTTTGCTCAAATGCAGCCTCACGACGCTTTTAAGCAGGAAACAGAGCAGCCTCAGATGGGTACCGCTTCATTGCAGGAATTGCCTGGGTTTAGTACTTATGCACGATCAATGAATCAGTTGATTCAAATGCAGGAACTTCCAGCAGGGTTTGACATGCGGGGTTTGATAGAAGGTAAGATGGGAGGAATGGAATTTCAGCAATTAAAGTCTAAGGGGACTGTGCAGATTGGTGAAATGGGTAGAAGAGATCAAGCAGAAGGTTCTGTAGAGAGATCAAAGGGATCAGAAGGAGAGGTGCAGGCAAACGAAGCATCGTCCTCGCGACTTCGAAGAAGGAAGGATGATCCGGATAGGAAGACAGTGACGGTTCCTGCGCCTCAGTTTGGAAATCCAGAGATGCCACCGGAGGATGGCTTCACTTGGAGAAAATATGGCCAGAAAGAGATATTGGGCTCCAACTACCCCAGGAGTTACTACAGGTGTACCCACCAGAAATTCTACGAATGCCCAGCCAAGAAGCAAGTGCAGCGACTTGATCACAATCCTAACATGTTTGCAGTAACATACCGAGGTAATCACACCTGCATTATGTCTTCCACAGCTCCATCATCAGTTCCACCACCATACCTACTAGTTGATATCTCACAGCAGGAGATGACCCAGAGTATCACTTCCCCTCAGTTGTCTTCATCTTCAACTTCAGTTTCTCGGTGGCTATCATCGGGCCACCTCGGCCTGCACGGTGGTGACGGAAAGGCACCAGAAATTGTGGATGCCGGTAGTGCCAGTGCTGGTCCCTCAACCTCAAGATATGGTACCGATTATCCAGTAATAGATATGGCTGATGCCATGTTTAATTCTGGTAGTAGTAGTGTTAACAGTATGGAATCTCTCTTCCCATTTACCGAAGATCATAAATGGGAACCCAGAGACAAGAAAAGTTGA 1125 0.4622 MEDATHSLISRACELARNLESNLPSLAKQPDMLSMSIDEIVKILFAAQQRLFSQHQTPSSFAQMQPHDAFKQETEQPQMGTASLQELPGFSTYARSMNQLIQMQELPAGFDMRGLIEGKMGGMEFQQLKSKGTVQIGEMGRRDQAEGSVERSKGSEGEVQANEASSSRLRRRKDDPDRKTVTVPAPQFGNPEMPPEDGFTWRKYGQKEILGSNYPRSYYRCTHQKFYECPAKKQVQRLDHNPNMFAVTYRGNHTCIMSSTAPSSVPPPYLLVDISQQEMTQSITSPQLSSSSTSVSRWLSSGHLGLHGGDGKAPEIVDAGSASAGPSTSRYGTDYPVIDMADAMFNSGSSSVNSMESLFPFTEDHKWEPRDKKS 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0837 374 Gene3D WRKY domain 186 257 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi08g0837 374 SUPERFAMILY WRKY DNA-binding domain 193 255 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi08g0837 374 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 9 275 IPR044810 GO:0003700
Glsi08g0837 374 MobiDBLite consensus disorder prediction 309 330 - -
Glsi08g0837 374 MobiDBLite consensus disorder prediction 143 157 - -
Glsi08g0837 374 SMART WRKY_cls 195 257 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi08g0837 374 ProSiteProfiles WRKY domain profile. 196 253 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi08g0837 374 MobiDBLite consensus disorder prediction 133 196 - -
Glsi08g0837 374 Pfam WRKY DNA -binding domain 196 255 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi08g0837 374 MobiDBLite consensus disorder prediction 165 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0837 Glsi-ChrGlsi08 6284073 6286273 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0837 7 360 WRKY Transcription Factor Family AT2G40740 35.593 9.68e-48 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Glsi08g0837 WRKY 4.2e-27 CL0274