Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0834 ATGGTAAATGCATGCTTCCAACAAGGATACAGGGAAGGTAGCTGGAAGATCGTGGATTGTGGGGTTCATGAAAAAGATTGGCAGTTGCGGCATCCTCAAGGGGGAGCTGTGGGGCATCCTTTCGGGATTGGAGTAGGTGTTGTCAGAGAAGCGTTTTGTTTCCGTTGTCGTCCTTGTACGATTAATATCATTGCAGCAGCTCCTTTATTGCAACTGCGTTTATTATATATCTTCTGCGACGCAGCTTCTTGTTCGTCATTTCATTACAAACATAAGAGAGAGGAAAAAGGGGAAGAGAGCGAAGCAGCGTACATGGCTTCTGGGTTTGCAGGTTCTTCTTCTTCTTCTACGAGTTGGGTCGTGGAAAACGGGGATATACCCCATGTTTTAGCCGTTGACGACAGTCTCATTGATCGCAAACTCGTTGAGAAGCTTCTCAGAAACTCTTCTTGCAAAGTCACAACTGCAGAGAATGGGCCAAGAGCCTTGGAGTTCTTGGGCTTGGCAAGCGGTGAACAGAACACCAAGAAGGGCACTAGAAACAAAGTAAATTTGGTTATCACAGACTATTGTATGCCTGGGATGACAGGCTATGAGCTACTTAAGAAAATAAAGGAATCGTCTATCATGAAGGAGGTTCCGGTGGTGATTATGTCATCCGAGAATGTCCCAACTCGGATTAACAAGTGTTTGGAAGAAGGAGCTCAGACGTTCATCTTAAAGCCCCTTAAACAATCTGACGTAAATAAACTGACCTGCCGGTTGATGAACGGCAAAGGCTAA 783 0.4534 MVNACFQQGYREGSWKIVDCGVHEKDWQLRHPQGGAVGHPFGIGVGVVREAFCFRCRPCTINIIAAAPLLQLRLLYIFCDAASCSSFHYKHKREEKGEESEAAYMASGFAGSSSSSTSWVVENGDIPHVLAVDDSLIDRKLVEKLLRNSSCKVTTAENGPRALEFLGLASGEQNTKKGTRNKVNLVITDYCMPGMTGYELLKKIKESSIMKEVPVVIMSSENVPTRINKCLEEGAQTFILKPLKQSDVNKLTCRLMNGKG 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0834 260 Gene3D - 125 258 - -
Glsi08g0834 260 FunFam Two-component response regulator ORR5 127 258 - -
Glsi08g0834 260 CDD REC_typeA_ARR 129 251 - -
Glsi08g0834 260 PANTHER TWO-COMPONENT RESPONSE REGULATOR 128 255 IPR045279 GO:0009736
Glsi08g0834 260 SMART REC_2 127 255 IPR001789 GO:0000160
Glsi08g0834 260 Pfam Response regulator receiver domain 129 249 IPR001789 GO:0000160
Glsi08g0834 260 SUPERFAMILY CheY-like 128 256 IPR011006 -
Glsi08g0834 260 ProSiteProfiles Response regulatory domain profile. 128 256 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0834 Glsi-ChrGlsi08 6259159 6262920 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0834 111 257 Response Regulator Gene Family AT3G56380 66.216 5.46e-61 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Glsi08g0834 Response_reg 9.8e-22 CL0304