Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0822 ATGGGCGAGGGAGAACAATTTCAGCTGGGAACTGTCGGGGCGTTGACTCTATCTGTGGTATCATCAGTGTCGATTGTAATTTGTAATAAGGCACTAATGAGCTCACTGCGTTTCATTTTCGCTACAACTTTGACAAGCTGGCATCTGCTTGTCACATTTTGTTCTCTTCATGTGGCACTAAAAATGAGATTCTTTGAGCACAAACCTTTTGAGAAGAAAGCTGTAATGGGATTCGGGATTCTAAATGGAATCTCAATTGGACTCCTAAACTTGAGCTTGGGGTTCAATTCCGTTGGCTTTTATCAGATGACTAAGCTGGCTATCATTCCATGCACTGTTCTGTTGGAGATCCTTTTTCTGGGGAAGAGATTCAGTAAAAGAATTCAATTTTCCCTTGTTATTCTCCTTCTAGGTGTTGGGATTGCAACAGTCACTGATTTGCAACTCAATGCTTTGGGCTCTTTCCTATCTTTTCTAGCTGTGATTACAACATGCGTTGCTCAGATTATGACAAATACCATCCAGAAGAAGTTTAAGGTTTCTTCCACCCAGTTACTTTACCAATCATGTCCATATCAAGCAGCCATTTTGTTAATCTCTGGTCCGTATCTGGATAAACTTTTGATCAACCAAAATGTATTTGCTTTCAAATACACAACACAAGTGACGATTTTCATCGTTCTTTCCTGCCTCATCTCCATCTCTGTAAATTTTAGTACATTTCTTGTGATTGGAAAGACATCTCCAGTCACTTATCAGGTTCTTGGACACCTGAAGACATGCCTTGTATTGGCTTTTGGCTATATTTTACTTCATGACCCATTCAGCTGGAGGAACATCTTGGGGATTTTGATAGCCCTGATTGGGATGATATTGTATTCTTACTATTTTTCCCTCGAGAACCAACAAAAAGCTGCTGAAGCTGCAGCGCAAACATCCCAGGCAAGAGAAGGTGATTCTGATCCTCTCATTAATGTGGAAAATGGAAGTGTAGCATTGACTAACACAGTTGGACAGAAGGTCCCTTTATGGGGTTCTCCAGAGACCGAAGCTAACCAACCTTGTTGGAAGCAAGGAGAGCTAAATACTGATCTTTCTGGCATGAGAATTCCCCCTGCATTTTGTTTTCCAAAGATCCATAAGTTGCTCGATAAGTGGGATGTTGGGCCTCTTTCCCGTATAAAAGCCACAAGTGATCCAAACCCTAATGCTATATTTCTCGTCGTCGGCAAAACTGTTGCTAGAGGCGATCAGTTAGAGCTTCGGATCCCATCAGCCATGACTTTCAAGAGAAGGAACGGTGGCCGCAACAAGCACGGTCGTGGACATGTCAAATTCATTCGCTGCTCCAACTGTGGCAAATGTTGCCCTAAGGACAAGTCAATCAAGAGGTTTCTTGTGAGGAACATTGTTGAGCAAGCTGCAGTTAGGGATGTTCAGGAAGCCTGTGTATATGAACAGTACACCCTTCCAAAGCTCTATGTTAAGATGCAGTATTGTGTGTCCTGTGCAATTCACTCCCATGTTGTGAGGGTTCGTTCTCGCACTGATAGGAGGAAACGTGAGCCTCCACAGCGATTCATCAGGCGCAGGGATGATCCACCAAGGCCTGGTCAGCCTGGTCAAGCACCTCGTCCTGCTGGAGCAGGAGTTCCAGCCCGTCCCTAA 1668 0.4382 MGEGEQFQLGTVGALTLSVVSSVSIVICNKALMSSLRFIFATTLTSWHLLVTFCSLHVALKMRFFEHKPFEKKAVMGFGILNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTVLLEILFLGKRFSKRIQFSLVILLLGVGIATVTDLQLNALGSFLSFLAVITTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQAAILLISGPYLDKLLINQNVFAFKYTTQVTIFIVLSCLISISVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYILLHDPFSWRNILGILIALIGMILYSYYFSLENQQKAAEAAAQTSQAREGDSDPLINVENGSVALTNTVGQKVPLWGSPETEANQPCWKQGELNTDLSGMRIPPAFCFPKIHKLLDKWDVGPLSRIKATSDPNPNAIFLVVGKTVARGDQLELRIPSAMTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKSIKRFLVRNIVEQAAVRDVQEACVYEQYTLPKLYVKMQYCVSCAIHSHVVRVRSRTDRRKREPPQRFIRRRDDPPRPGQPGQAPRPAGAGVPARP 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0822 555 Gene3D Ribosomal protein S26e 427 540 IPR038551 -
Glsi08g0822 555 PANTHER 40S RIBOSOMAL PROTEIN S26 427 549 IPR000892 GO:0003735|GO:0005840|GO:0006412
Glsi08g0822 555 MobiDBLite consensus disorder prediction 516 536 - -
Glsi08g0822 555 Pfam Triose-phosphate Transporter family 21 294 IPR004853 -
Glsi08g0822 555 SUPERFAMILY Multidrug resistance efflux transporter EmrE 218 294 - -
Glsi08g0822 555 Pfam Ribosomal protein S26e 427 531 IPR000892 GO:0003735|GO:0005840|GO:0006412
Glsi08g0822 555 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 144 - -
Glsi08g0822 555 MobiDBLite consensus disorder prediction 512 555 - -
Glsi08g0822 555 FunFam 40S ribosomal protein S26 427 540 - -
Glsi08g0822 555 ProSitePatterns Ribosomal protein S26e signature. 499 506 IPR000892 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0822 Glsi-ChrGlsi08 6210883 6218206 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0822 427 542 Cytoplasmic Ribosomal Protein Gene Family AT2G40590 83.621 2.71e-70 220