Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0816 ATGCTGAGAGATGGTAATGGTAGTGATCGCCTCTCAGCCGAAAAGTCCTTCCGAATCATGAAGCAGAATGATAGGTTCTTGTCCAGGCTGATGGCGAAGGAGACCTCCGTGGCCAACTCTTCTTCGAGGGTATTGTACTATGGAGAAACATCAGTTGCAGTTCCTTTTTTGTGGGAATCACAACCAGGCACTCCCAAGCACCCACTGTCTGAGACATCTGTGCCTCCCCTTACACCCCCACCTTCCTATTATTCCAACTCCAAGTCCAATACCAAGCGAAGAAGTTCAAAAGACAAGCTATTTTCAAGCATTTTGCCAAGATTTACAGTAACTCGGAATGAATGTAGTTCTTTCAAGTATTGCCAAGTTAGGTTGGGGATGAGAGAGGACAACGGAGCGATTTGTAAGCCTGAAAATACGGGTCAAACAAGAATGGATGGTGCCACTCCCTTAGAGCCTAAGCATCCCTTCTTACGACTACTCCAATGCAGTCAGTTCGTCTTAAAGGGCCGGCTTGCGGTTTCTACAAGGGAGATATTTGATGAGATAACAGGCAAGAAGATCAAGAGGGAAGGAGATGTTTCTTCTCAAATGGGAGGAAGACACATGTTGGGTCCCCCTGGAACCCTGAATACCATAACCCCTTGTGCAGCATGTAAGTTGTTGAGACGAAGATGTGCCCAAGAATGTCCCTTTTCTCCATATTTTTCTCCTCATGAGCCCCAAAAGTTTGCTTCTGTCCACAAAGTCTTCGGTGCCAGCAACGTCTCAAAGATGCTAATGGAGGTACCAGAGCGTCAAAGAGCCGATGCAGCAAATAGTCTAATTTATGAGGCTAATGTGAGGCTAAGAGACCCAGTTTACGGATGCATGGGTGCAATTTCTTCTTTGCAACAGCAAGTTCAAACTTTACAAGCCGAACTTAATGCAGTAAGGGCAGAAATACTTAAATACAAACTTAGGGAAGCTAACATGATGCCAATGCTCCCTGCACCCGGAGCTGTTTCAGTTGCAGCTCCACCACCACCCCCACCACCTCCTCCTCGTCCTCCTACTTCTTCCTTGTACACCAATTATATTACAATTTCAAGCATGAGGAAGTGGGATAGGAGTTGCCTGGTACTGTTGGGTATGGAATTTAATGTGCATGTGCCAGCACAGGATCACTATGACAATACTCAAAACACATTAATTCGTGCCACCCAAGTATCTAAATGGCTGTCTCGAGTTACGGGAGACAAAAGGTATGCTTGTGATCTTCACAATGTTGGGTTACAACACTTCTGA 1287 0.4569 MLRDGNGSDRLSAEKSFRIMKQNDRFLSRLMAKETSVANSSSRVLYYGETSVAVPFLWESQPGTPKHPLSETSVPPLTPPPSYYSNSKSNTKRRSSKDKLFSSILPRFTVTRNECSSFKYCQVRLGMREDNGAICKPENTGQTRMDGATPLEPKHPFLRLLQCSQFVLKGRLAVSTREIFDEITGKKIKREGDVSSQMGGRHMLGPPGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPQKFASVHKVFGASNVSKMLMEVPERQRADAANSLIYEANVRLRDPVYGCMGAISSLQQQVQTLQAELNAVRAEILKYKLREANMMPMLPAPGAVSVAAPPPPPPPPPRPPTSSLYTNYITISSMRKWDRSCLVLLGMEFNVHVPAQDHYDNTQNTLIRATQVSKWLSRVTGDKRYACDLHNVGLQHF 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0816 428 MobiDBLite consensus disorder prediction 63 97 - -
Glsi08g0816 428 Pfam Lateral organ boundaries (LOB) domain 215 312 IPR004883 -
Glsi08g0816 428 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 211 344 - -
Glsi08g0816 428 ProSiteProfiles LOB domain profile. 214 315 IPR004883 -
Glsi08g0816 428 Coils Coil 294 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0816 Glsi-ChrGlsi08 6175040 6181132 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0816 201 336 AS2 family AT2G40470 84.559 5.01e-70 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Glsi08g0816 LOB 2.5e-40 No_clan