Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0810 ATGAAAAGACAAACATATTTTAATTCCATTTTACGTAAAAGCAATTGGGTTGGGATTGGTTTGGTTAATTTGAAAATATGGTCCAACGTTGTCATTATAAGAGAAGCACGTATTATTGGCTCTGTGTATCGGAAGAAGCTAGCTCAGATGGCTTCTTACTACTTCCTCTTGCTCGTTCTTGTCGGTGCTACTGTAATTGCTGAAGTAGATGCCGAAAAGCTGCTATGTCCAGACTTCTACTCCTGCAGCTGCCCCAAACTGCTGCCCATAGTCAAGGAAGAAGTCGCAAAAGCCATTAAAATTGAAACACGAATAGGAGCTTCCTTACTCAGATTGCATTTCCACGACTGCTTTGTGAACGGTTGTGATGCATCAATACTGTTGGATGATACTGGGAACTTTATAGGAGAGAAAACGGCAGCACCTAACAATAACTCAGCAAGAGGATTCAACGTGATTGATGACATCAAAGCCCAGGTCGAGAAAGCATGCCCTGGAGTGGTGTCCTGTGCTGATATTCTTGCTCTCGCTGCTCGAGACTCTGTCCTTCACTTAGGGGGTCCTTTCTGGGAAGTGGATTTGGGAAGAAGAGATTCTACCACAGCAAGCAGAAGTGATGCCAATAAGAGCATTCCCGCACCCTTTCTCAATCTAAACGCTCTTAAAACGAATTTCGCCAACCAAGGGCTTTCAGTTAAGGACTTGGTCGCTCTTTCAGGTGCACATACTATTGGCCTGGCTAGATGTGTACAATTCCGAGCACACATCTATAATGACTCCACCATTGATGCTTCCTTTGCAAAGTCCCTGCAGAGAAAGTGCCCCAGAAGTGGAAATGACAATCTACTCCAACCATTTGACTTCCAAACTCCATTCCATTTCGATAATTTATATTTTCAGCATTTGCTTTACAAGAAGGGCCTTCTCCATTCTGACCAGGAGCTGTTTAATGGCAGCTCTACGGATAATTTGGTTCAGAAATACGCTGGCAACACCAATTTATTCTTTAAAGACTTTGCTGAGGGCATGGTCAAAATGAGCCATATCAAGCCTCTCACAGGGAGCAATGGCCAGATCAGGATCAACTGCAGAAAAGTAAATTAA 1104 0.4339 MKRQTYFNSILRKSNWVGIGLVNLKIWSNVVIIREARIIGSVYRKKLAQMASYYFLLLVLVGATVIAEVDAEKLLCPDFYSCSCPKLLPIVKEEVAKAIKIETRIGASLLRLHFHDCFVNGCDASILLDDTGNFIGEKTAAPNNNSARGFNVIDDIKAQVEKACPGVVSCADILALAARDSVLHLGGPFWEVDLGRRDSTTASRSDANKSIPAPFLNLNALKTNFANQGLSVKDLVALSGAHTIGLARCVQFRAHIYNDSTIDASFAKSLQRKCPRSGNDNLLQPFDFQTPFHFDNLYFQHLLYKKGLLHSDQELFNGSSTDNLVQKYAGNTNLFFKDFAEGMVKMSHIKPLTGSNGQIRINCRKVN 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0810 367 ProSitePatterns Peroxidases proximal heme-ligand signature. 234 244 IPR019793 -
Glsi08g0810 367 FunFam Peroxidase 212 346 - -
Glsi08g0810 367 Gene3D - 78 367 - -
Glsi08g0810 367 Pfam Peroxidase 91 330 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi08g0810 367 SUPERFAMILY Heme-dependent peroxidases 75 367 IPR010255 GO:0004601|GO:0006979|GO:0020037
Glsi08g0810 367 PANTHER PEROXIDASE 72-RELATED 73 366 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi08g0810 367 PRINTS Plant peroxidase signature 84 103 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi08g0810 367 PRINTS Plant peroxidase signature 108 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi08g0810 367 PRINTS Plant peroxidase signature 285 300 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi08g0810 367 PRINTS Plant peroxidase signature 148 161 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi08g0810 367 PRINTS Plant peroxidase signature 167 177 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi08g0810 367 PRINTS Plant peroxidase signature 301 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi08g0810 367 PRINTS Plant peroxidase signature 341 354 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi08g0810 367 PRINTS Plant peroxidase signature 233 245 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi08g0810 367 PRINTS Plant peroxidase signature 186 201 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi08g0810 367 ProSiteProfiles Plant heme peroxidase family profile. 74 367 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi08g0810 367 FunFam Peroxidase 78 220 - -
Glsi08g0810 367 PRINTS Haem peroxidase superfamily signature 186 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi08g0810 367 PRINTS Haem peroxidase superfamily signature 106 120 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi08g0810 367 PRINTS Haem peroxidase superfamily signature 168 185 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi08g0810 367 PRINTS Haem peroxidase superfamily signature 234 249 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi08g0810 367 PRINTS Haem peroxidase superfamily signature 287 302 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi08g0810 367 CDD secretory_peroxidase 75 366 IPR033905 GO:0004601|GO:0042744
Glsi08g0810 367 ProSitePatterns Peroxidases active site signature. 106 117 IPR019794 GO:0004601
Glsi08g0810 367 Gene3D Peroxidase, domain 2 212 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0810 Glsi-ChrGlsi08 6125052 6126535 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0810 72 367 Peroxidase AT5G05340 59.866 2.35e-129 372