Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0807 ATGGATAACCACTGGGTCGCCCTCATTCAGCCAATTGTTGTTAAGCTCGATACTGTTGTCAATTTCTCAATGATGTGCCATTCACATTCAGTACATTTTCTGAAAGATCACGAAAGGAGAGAGACAAAGGAAGAGCCCAATATGGTTTCTAGAGAGCACAGCCACAAGAGAGCAACACTGCATGAGAAGCTGCAACTCCTTCGTTCTATTACTAACTCTCATGCTCTAAACCAAACCTCGATCATTATCGATGCATCAAAGTATATCGCAGAGTTAAAGCAAAAGGTAGAAAGACTGAATCAAGACATACCCACTGCACAAACTTCAATTGACAAAAATCCGTTGCCTATGGTGACGGTAGAAACCCTCGAAAAGGGATTTATTATAAACGTTTTTGCAGCAAAGAGCTGTCCAGGTCTGCTTGTTTCCATATTGGAGGCCTTTGAAGGGATGGGTCTTAATGTGGTGGAAGCTAGGGTTTCTTGCACAGACACATTTCAATTTCAAGCAGTTGGAGGAGAAAATGAAGAAGGAGTTAGTATCGATGCACGAGGTGTGAAACAAGCAGTGGGACAAGCAATAAAGAACTGGAGATCAGAAAGTGCTAGTGATGAACAGTAA 621 0.4203 MDNHWVALIQPIVVKLDTVVNFSMMCHSHSVHFLKDHERRETKEEPNMVSREHSHKRATLHEKLQLLRSITNSHALNQTSIIIDASKYIAELKQKVERLNQDIPTAQTSIDKNPLPMVTVETLEKGFIINVFAAKSCPGLLVSILEAFEGMGLNVVEARVSCTDTFQFQAVGGENEEGVSIDARGVKQAVGQAIKNWRSESASDEQ 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0807 206 CDD ACT_UUR-ACR-like 138 194 - -
Glsi08g0807 206 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 41 197 - -
Glsi08g0807 206 Coils Coil 82 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0807 Glsi-ChrGlsi08 6113039 6116770 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0807 60 190 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 27.778 6.87e-08 49.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g0807 08 6113039 6116770 Glsi08g0807 08 6113039 6116770 ECH
Glsi08g0807 08 6113039 6116770 Glsi10g1505 10 10099011 10102876 ECH