Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0806 ATGAAGCTTCACTCAGACATCCCTGGAGTTACTGTCCCTCTCCTTCCGGACACACAGAACTCACCACAACATCCAAATTCACAACATGGTTCAATATCCGGAGCGGTGTTCAACATCTCAACCACCGTGATCGGTGCCGGAATCATGTCGATTCCGGCGACGATGAAGGTGTTGGGCATAGTGCCGGGGTTCGCCGTTATCGTGGCAGTGGCATTCATAACTGATATCACGGTGGAGTTCATGTTGAGGTACACTAGCTCCGGCGAATCAATCACGTACGCCCGCATGGTGGGCGAGTCCTTCGGCCCACTTGGATCACTCGCGGTTAAGATATGCGTCATCATCACCAATCTTGGTTGCCTCATCATCTACTTTATTATACTGGGAGACGTGCTGTGTGGAAATGAGTCAAAAGGAGAGTTGCACTTGGGCGTTCTACAGGAATGGTTCGGCATCCAGTGGTGGAGCTCTCGGGCTTTTGCCCTTCTCCTAGTTGCCCTCTTCATCATGCTTCCCCTTGTTCTGTTACGCCGTGTTGATTCATTGAGGTACAGCTCTGCAATTTCAATTCTACTAGCATTGGTGTTTGTTGCAATCAGCTCATCAATGGCGTTTTACGCCTTATGGTCCGGCAAAACTCAATCTCTGAGACTACTTCCTGATTTCTCTCAAGTCTCCATCTTTGATCTTTTCACCACTGTCCCTGTCTTCGTCACGGGTTTCGGATTCCATGTCAATGTTCATCCAATTAGAGCAGAGCTTGGGAAAGCCGGAGATATGAGCCTAGCTTCGCGGCTTTCACTGATGATCTGCGTGGTCATTTACTTTGCTATTGGCTTCTTCGGGTACCTCCTGTTCGGAGACTCCATCATGCCGGATATGCTGGTAAACTTTGACCAGAATTCGGATTCCAGTGTTGGAAGATTGCTGAACGACGTAGTGCGGTTAAGCTACGCACTCCATCTTGCGCTTGTGTTCCCCATTATGAACCACTCGTTGAGGTTGAACATAGACGAGCTATTATTCTCAAACAAAAACAAGGGTGCACTGGCATCAGACACCCCACGTTTTATGTCTCTGACATTGGCGTTGCTGGCCCTCACGTACACGGTGGCCGTAGCAATTCCAAACATCTGGTATTTCTTCCAGTTCTTGGGCTCCACTACCATTGTTGGCCTCTCCTTCCTATTCCCTGCTGCTATTATTTTAAGGGATGTGCACGGTATATCAACGACAAAAGATCGAGTCGTGGCAATTGCGGTGATTAGTCTGGCACTGGTGACAAGCGGAACTGCTATATGGACCAACTTGTATGGTTCAAATTCAAATGCAGACAAAACGAGAGAACAATTGGAGCACCAATTTTCTTTCTCCTCACTCCACAAATTCACCGCCGACATGTCGCCGGCGGCCGGGGTACTCGTCCCTCTCTTGCCAGAAGGGAAAGCAGCTGCCAAACCAGCATCCGTTTCGGGCGCCGTATTCAACGTCGCCACCACCATAATCGGCGCCGGAATTATGTCCATTCCAGCGACTATAATGGTTGTGGGTGTCATTCCTGCTTTCGTGATGATTGTGATCATTGCTCTGCTGGCTGAACTATCGGTGGATTTCCTTATGAGATTTACGCATTCCGGTGAGACGACCGCATACTCCGGCGTCATGAGGGAGGCATTCGGGCCGGTAGGAGCAGTAGCCACACAAGTTTGTGTCGTTGTTACCAATTATGGGTGCTTAATTATGTACTTAATTATTATAGGGGATGTGCTTTCCGGAAATCAACCTGAAGGTGAAGTGCACTTGGGCCTTTTGCAACAGTGGTTTGGAATTCATTGGTGGAATTCTCGGGAATTTGCTCTGCTCGTCGTCTTAGTCTTGGTTATGCTGCCGTTGGTCTTGTATCGACGAGTAGAGTCCTTGAAGTTCAGTTCTGCAATAGCTACTCTTCTTGCGGTGGCATTCGTTGGCATATGTTCTGGGTTAGCGATCGCCGCTCTCTTCGCAGGAAAAACACAAACTCCAAGATTGCTTCCTCAGTTAGATCACCAGTCCTCTTTTTTTAATCTGTTCACTGCTGTTCCAGTCATAGTCACTGCTTTCACATTTCATTTTAATGTGCATCCAATTGGGTTTGAGCTTGCCAAGCCATCTGATATGACGACAGCAGTTCGAATAGCAATAGTGCTCTGCGCAGTTATCTACTTCGCAATAGGCCTATCAGGGTACCTCTTGTTTGGGGACTCAATCCAGTCAGACATTCTCATCAATTTTGATCAGAATGCTGATTCTGCAGTTGGCTCCTTGCTCAATAGTTTAGTCCGGTTAAGCTATGCATTCCACATTATGCTGGTGTTCCCTCTCCTAAACTTCTCTTTGAGAGCCAACTTAGATGAACTGCTCTTCCCCACCAAGTCTCATCTAGCCACAGACAACAAAAGATTTATGACCATCACTCTGGTGCTGCTAGTGTCCAGCTATCTTGCTGCTATAGCACTCCCGGATATATGGTACTTCTTTCAGTTTTTGGGATCAACATCTGCAGTTTGCCTTGCCTTCATCTTCCCTGGTGCCATTGCTCTAAGGGATGCTCAAGGTATATCGACAAGAACAGACAAAATTATGGCACCGATAATGATTATCCTGGCTGTAGTGACAAGTGTGATTGCCATTTCCATCAACATATACAATTTGTTTCGCCAACAGGTCATAAATTGA 2715 0.4733 MKLHSDIPGVTVPLLPDTQNSPQHPNSQHGSISGAVFNISTTVIGAGIMSIPATMKVLGIVPGFAVIVAVAFITDITVEFMLRYTSSGESITYARMVGESFGPLGSLAVKICVIITNLGCLIIYFIILGDVLCGNESKGELHLGVLQEWFGIQWWSSRAFALLLVALFIMLPLVLLRRVDSLRYSSAISILLALVFVAISSSMAFYALWSGKTQSLRLLPDFSQVSIFDLFTTVPVFVTGFGFHVNVHPIRAELGKAGDMSLASRLSLMICVVIYFAIGFFGYLLFGDSIMPDMLVNFDQNSDSSVGRLLNDVVRLSYALHLALVFPIMNHSLRLNIDELLFSNKNKGALASDTPRFMSLTLALLALTYTVAVAIPNIWYFFQFLGSTTIVGLSFLFPAAIILRDVHGISTTKDRVVAIAVISLALVTSGTAIWTNLYGSNSNADKTREQLEHQFSFSSLHKFTADMSPAAGVLVPLLPEGKAAAKPASVSGAVFNVATTIIGAGIMSIPATIMVVGVIPAFVMIVIIALLAELSVDFLMRFTHSGETTAYSGVMREAFGPVGAVATQVCVVVTNYGCLIMYLIIIGDVLSGNQPEGEVHLGLLQQWFGIHWWNSREFALLVVLVLVMLPLVLYRRVESLKFSSAIATLLAVAFVGICSGLAIAALFAGKTQTPRLLPQLDHQSSFFNLFTAVPVIVTAFTFHFNVHPIGFELAKPSDMTTAVRIAIVLCAVIYFAIGLSGYLLFGDSIQSDILINFDQNADSAVGSLLNSLVRLSYAFHIMLVFPLLNFSLRANLDELLFPTKSHLATDNKRFMTITLVLLVSSYLAAIALPDIWYFFQFLGSTSAVCLAFIFPGAIALRDAQGISTRTDKIMAPIMIILAVVTSVIAISINIYNLFRQQVIN 904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0806 904 Pfam Transmembrane amino acid transporter protein 30 432 IPR013057 -
Glsi08g0806 904 Pfam Transmembrane amino acid transporter protein 487 897 IPR013057 -
Glsi08g0806 904 PANTHER AMINO ACID TRANSPORTER 483 885 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0806 Glsi-ChrGlsi08 6102684 6108367 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0806 477 897 Amino Acid or Auxin Permease AAAP Family AT3G56200 60.377 1.79e-173 508