Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0790 ATGGATTTACTCCCGGCCAATGTAACCATCGTTACTACCAGTGGCCGAAGATTCCCAATGTTTTGTACAACACAAAATGGCATGGTCATAGAGGATGAGGGTATCTGGTTTTATGTTAATCCATTGAAATACGTTTTCCCAGTATTGTTGACACAGGTATTTTTGCTGTTTCTGGTCTCTCGAGCGCTTTACTATATTCTCAGGCCTCTCAAGCAACCCAAATTTATGTGCAGCGTCCTGGCAGGCATCATCCTGGGACCTTCAGTTCTAGGACGTCTCGAAACATACAGAAGCATCATATTTGGGTACCAACCACTTCTATTAATGAATACATGCTCCACGATAGGCGTCATATATTTCATCTTCCTTGTTGGAGTGAAAATAGACGTAGGCATGATCTTAAGGGCGGCCGGGAGTGCTTGGAAGATTGGCCTGATAGCGTACCTCTCTTCTTTCATGGCCATGTCTTGCCTCCTTCTTCCATTCGCCGATAGTCTTCCTAGATTCTCCAAGAACAACCTATTTGTTCTCTTCTTTCCAGCCTACGCATCTATCACTAACTTCCCCGTGATCACTCAAGCATTGGATGAACTCAACCTCATGGGTTCTGAGCTAGGCCAGCTTGCCACGTCTGCATCCATGCTCAACGACACCATCCAATGGTTTGTAATGATAGTGGGAATTGTTTTTAGGCAAAACAACGCAACGCAAGCTATAGCAGCCTTACTCAGTTTCTTGGCATTACTAGTTTTCAGCTTCTTTGTGCTAAGACCAATGATACTACGGATTAAGAAGACTACACCCGAAGGTCAGCCCCTAAACGAGACTTACACTGTGCTGATAATACTTGGAGTTCTGGCCATGGCTGCTCTGTCTGATTGCGTAGGCATACCCTACGTTCATGGCCCTTTAATTCTGGGTTTGATCATCCCAGATGGTCCCCCTATAGGTGCCATTGTTGTGGAGAAAGTTGAAGCGATCATTTCACATTTTTTCCTTCCCCTGTTCTTTATGCAAGTTGGGTATTCCACAGATTTGTCAACAATTGAATTCTCAGACTCATTTATCAAGTTCGAGTTAGTCATCATTGCGGGATATGTTGCAAAGATGGTGGGAACTTTCCTAACTTCATTAAGTTGCAAAATTAGCACCAGAAATTCCTTCTTGCTCGGCCTTATTATGAACATTGAAGGCATAATGGAACTAGTCGCCTACTCTCGTTGGCAATCCCAAAAGCTTATCGACGATCAATACTACACTCAAAATGTGCTGACAACAGTGGTTGTGACAGGGATTGTAACCCTATTGATTGAGATCTTCTACAAGCCTCTTTCTCTCCTGCGGCCCCACAAATCAGACTCCATACAACGTCATTCCCGAACAATCCAAACCGCTAGTCGCAGCGCTGAGTTCCGAATCCTCACTTGTGTACACACACCAGAGAGTGTGAGTAGAATCATCACCCTTCTGGAAGCTTCCAATCCGACCCCATCAAGCTCCATTTCTGTCTATGTGATCCACCTTATTGAGCTCACGGGTCGGGCCGCACCTGTTATCGTCCCATACAAAAAGAGAACCTTACTGAGCTATACTCATGGTGGCAGCACAGACCAAATTGTACGTGCCTTTCAGAACTACACCAAATTCTCCAAAGGCCCAGTGAGTGTTGAGCCGTACATTAACGTTGCCCATTACAGGAACATGCACGAGACCGTTTGTTGTCTAGCAAATGACATGAATATCCCCTTCATTATTCTTCCATTTCACGACAACGAACGGCATGTGTACGGAAACAAAACGGCCGCCGCCGTACGCGCCCTCAATGTCAACATACAAAACCGCGCGTCCTGCACGATAGGGATTCTGGTGGAGAGGGGGTTTCAGCGCCAAGTAAGCACGACGCACTTTGCTCTCAACGTGGCCGTGATCTTCCTTGGAGGAGCCGACGACCGGGAGGCGCTGGCTCTGGCTTCGCGGATGTCGGAGAATGTGGACGTGAACATAACGCTTATGAGGGTGACGGTGTGGGACAGAAAACTGATCGTCGTGAATGAGTGGAGGGACCAGCAACTGGAGGAGATAGAGAGGTTGATGGATGAGTCGGCGGTGGACGAGTTTAAGATGAAGAACTTGGGGAACGCTTGTGTCGTTTTGAATGAAGTTCTAGTAAACGACAGCGGAGAAGGGTTTGCGGCGATTCGGGCAATGGAGAATGAAGATTTTGATTTGTTCATAGTGGGGAAACGACACGGGGGTGCGGCGTTTGTGGATGAGGAAAAGGTGGTGGATTTTGTGGAGGCTAGGGAATTGGGAGTGATTGGGGAGATGTTGGCGTCCAAGGATTTCCGAGATGGGACGGCGACGGTATTGGTAACGCAACATTTTGGGGGCACGGTGAATGAGTTTGTTCAGGGCAGTGGTTATATGAACAGTCACTCAGATCACGACCAACGTTGTCAGATTTGCTGA 2469 0.471 MDLLPANVTIVTTSGRRFPMFCTTQNGMVIEDEGIWFYVNPLKYVFPVLLTQVFLLFLVSRALYYILRPLKQPKFMCSVLAGIILGPSVLGRLETYRSIIFGYQPLLLMNTCSTIGVIYFIFLVGVKIDVGMILRAAGSAWKIGLIAYLSSFMAMSCLLLPFADSLPRFSKNNLFVLFFPAYASITNFPVITQALDELNLMGSELGQLATSASMLNDTIQWFVMIVGIVFRQNNATQAIAALLSFLALLVFSFFVLRPMILRIKKTTPEGQPLNETYTVLIILGVLAMAALSDCVGIPYVHGPLILGLIIPDGPPIGAIVVEKVEAIISHFFLPLFFMQVGYSTDLSTIEFSDSFIKFELVIIAGYVAKMVGTFLTSLSCKISTRNSFLLGLIMNIEGIMELVAYSRWQSQKLIDDQYYTQNVLTTVVVTGIVTLLIEIFYKPLSLLRPHKSDSIQRHSRTIQTASRSAEFRILTCVHTPESVSRIITLLEASNPTPSSSISVYVIHLIELTGRAAPVIVPYKKRTLLSYTHGGSTDQIVRAFQNYTKFSKGPVSVEPYINVAHYRNMHETVCCLANDMNIPFIILPFHDNERHVYGNKTAAAVRALNVNIQNRASCTIGILVERGFQRQVSTTHFALNVAVIFLGGADDREALALASRMSENVDVNITLMRVTVWDRKLIVVNEWRDQQLEEIERLMDESAVDEFKMKNLGNACVVLNEVLVNDSGEGFAAIRAMENEDFDLFIVGKRHGGAAFVDEEKVVDFVEARELGVIGEMLASKDFRDGTATVLVTQHFGGTVNEFVQGSGYMNSHSDHDQRCQIC 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0790 822 PANTHER CATION/H + ANTIPORTER 24 794 - -
Glsi08g0790 822 Gene3D - 48 445 IPR038770 -
Glsi08g0790 822 Pfam Sodium/hydrogen exchanger family 55 436 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0790 Glsi-ChrGlsi08 6040308 6042971 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0790 29 798 Antiporter Super Family AT2G13620 34.470 8.39e-146 447