Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0767 ATGAAGGGTTATGAGCCCCGTTCAAGCTCTTCTTGTGCAGCCTGCAAGTTATTGAAGAGAAGATGCATACCCAATTGTATATTTGCACCATACTTTCGCTCCGACGAGTGTAAGAAATTCGCAAAAGTCCACAAGGTGTTTGGGGCCAGCAATGTAAGCAAGATCCTCGTAGAAGTGCCGGAGGAGCAGAGGGAGGATACGGTGAATTCTCTGGCTTATGAGGCAGAGGCAAGGCTTAAAGACCCTGTTTATGGATGCATTGGTGCCATAGCTATGCTGCAGAGGAAGATGGTGGAGCTTCAACATGACTTGGCCATTGCGAAGGCTCGTCTTGCTCGTTATGCTGCTGCTGCTGCTGCTGCTACTACCGTCCCTTCCTCTGATATCTTGAATGCCCATGTTAGCTTGCCTCCCTTCCCTGACTTTTCTACTAGCTGTGAATTCACTGATAGCTTCTACCACAGCTCTTCATCTCAACTATTGAGCCGACATGAAACGGTCGATGATTTTATTCAAATCCCATATATATTTTGA 534 0.4682 MKGYEPRSSSSCAACKLLKRRCIPNCIFAPYFRSDECKKFAKVHKVFGASNVSKILVEVPEEQREDTVNSLAYEAEARLKDPVYGCIGAIAMLQRKMVELQHDLAIAKARLARYAAAAAAATTVPSSDILNAHVSLPPFPDFSTSCEFTDSFYHSSSSQLLSRHETVDDFIQIPYIF 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0767 177 Coils Coil 90 110 - -
Glsi08g0767 177 Pfam Lateral organ boundaries (LOB) domain 11 108 IPR004883 -
Glsi08g0767 177 ProSiteProfiles LOB domain profile. 10 111 IPR004883 -
Glsi08g0767 177 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 9 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0767 Glsi-ChrGlsi08 5889484 5890017 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0767 1 142 AS2 family AT3G11090 68.531 1.44e-66 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Glsi08g0767 LOB 8e-38 No_clan