Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0766 ATGGAATTCTCAATTCCATGTTATGTTACCCTCAATAATCCTGTAGCTGACGTCACCGCCGGTCACAATGCTCGGCCAAGGCCAATTGCTGCTCCCTTTGCCCTGCCCCTGCTGCACGGGGCCGAATCCGATGCTTCGCTTCCCACCCTAACCCTTACTCCTCCGTTTTTATCCATTTCACCTCATCAGTTCCGACGCGCCTTTCGATCATCCTATCCCAACCCGGAATCCCCCATGAACCGCCCAAACCCGAGTCGGTCCCAGCACGGCGGCAGAGAGGATTGTTGGAGCGAGGGGGCCACTGAGACATTGATCGAGGCATGGGGTGATCGTTATATTCAGCTCAACCGCCGTCACCTCCGTCAGAAGGACTGGAAGAATGTCGCTGATGCCGTCAACGCCCGTCAAAACGGCGTCAAGCCTCGCAAGTCCGACGTTCAGTGCAAAAACAGAATCGACACGCTCAAGAAGAAGTATAAGGTTGAGAAGTCGAAGCCGCCTCCGTCCAAGTGGGTCTTCTATCACCGTCTTGACACTCTGATCGGAGCTAACGCCGTCACTGACAAGAAAACTACGATCTTTACTTCAACCGTCAAATCATCGAAGCCGAAACTCAGCCCAAGTCTGATGTTTGTGTCAGCTCCGAAGCTCTATTCCGGTGGGCCTTCGAGGCTGGATTCCGGTGGCGGTTCTATGGAAAGTTCACTTGGGGATGACGAGGACGACGATGATACGGGGTTTGCTGGGAGAACAGTGAGGAAGCAAAGGTTTGAGACCGTGGATTTGTCTGAAGGAGCTGCGTTCAGGGAATTTGCGAGGGCGATTCTCAAGTTTGGGGAGATTTACGAGAGAATCGAGAGCTCGAAGCAGCAGCAAATGATGGAGTTGGAGAAGCAGAGAATGGAGTTGACTAAGGATCTCGAATTTCAAAGAATGAATATGTTCATGGATACTCAATTGGAGGTCGAGAGAATGAAACGCCCCGAGTATGCCACCACCTCAGCTGAACTTGTTTTAAGAAGGGCTTCTGTTATCAGACTCAGGAGTACAAGTATCTTTAAACTTAGTGCTTTACGTTTACATTTTATAGGTAAGAAGATGTAA 1104 0.5054 MEFSIPCYVTLNNPVADVTAGHNARPRPIAAPFALPLLHGAESDASLPTLTLTPPFLSISPHQFRRAFRSSYPNPESPMNRPNPSRSQHGGREDCWSEGATETLIEAWGDRYIQLNRRHLRQKDWKNVADAVNARQNGVKPRKSDVQCKNRIDTLKKKYKVEKSKPPPSKWVFYHRLDTLIGANAVTDKKTTIFTSTVKSSKPKLSPSLMFVSAPKLYSGGPSRLDSGGGSMESSLGDDEDDDDTGFAGRTVRKQRFETVDLSEGAAFREFARAILKFGEIYERIESSKQQQMMELEKQRMELTKDLEFQRMNMFMDTQLEVERMKRPEYATTSAELVLRRASVIRLRSTSIFKLSALRLHFIGKKM 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0766 367 Coils Coil 282 313 - -
Glsi08g0766 367 MobiDBLite consensus disorder prediction 68 95 - -
Glsi08g0766 367 MobiDBLite consensus disorder prediction 222 247 - -
Glsi08g0766 367 FunFam trihelix transcription factor ASIL2 96 161 - -
Glsi08g0766 367 Gene3D - 96 161 - -
Glsi08g0766 367 Pfam Myb/SANT-like DNA-binding domain 93 180 IPR044822 -
Glsi08g0766 367 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 73 327 IPR044823 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0766 Glsi-ChrGlsi08 5884648 5887809 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0766 265 327 Trihelix Transcription Factor Family AT3G14180 50.794 1.59e-15 75.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Glsi08g0766 Myb_DNA-bind_4 1.6e-24 CL0123